CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Fosb
(
Rattus norvegicus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSRNOG00000046667
T061333_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOSB
M04272_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX
0.916
1.000
FOSB
M08795_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A
0.916
1.000
Fosb
M08814_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A
0.916
1.000
FOSB
M04273_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX
0.916
1.000
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.889
0.836
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.889
0.836
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.889
0.836
FOS
M04327_2.00
Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV
SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX
0.884
0.820
FOS
M08069_2.00
Homo sapiens
DVTGASTCATN
NATGASTCABH
ChIP-seq
Mathelier et al.(2014)
MA0476.1
0.884
0.820
FOS
M07826_2.00
Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford
0.884
0.820
FOS
M07827_2.00
Homo sapiens
MTGASTCAYHN
NDRTGASTCAK
ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD
0.884
0.820
FOS
M07828_2.00
Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV
ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago
0.884
0.820
FOS
M08802_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A
0.884
0.820
Fos
M08819_2.00
Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN
Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A
0.884
0.820
FOS
M09988_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q4
0.884
0.820
FOS
M09989_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q6
0.884
0.820
FOS
M09990_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_02
0.884
0.820
FOS
M09991_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_03
0.884
0.820
FOS
M04328_2.00
Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB
SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX
0.884
0.820
Fosl1
M01805_2.00
Mus musculus
NNRTGACKYMN
NKRMGTCAYNN
PBM
Weirauch et al.(2014)
pTH5077
0.799
0.803
FOSL1
M04333_2.00
Homo sapiens
NRTGAWTCAYN
NRTGAWTCAYN
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_1
0.799
0.803
FOSL1
M04334_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_2
0.799
0.803
FOSL1
M04335_2.00
Homo sapiens
DRTGAYRCR
YGYRTCAYH
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_3
0.799
0.803
FOSL1
M04035_2.00
Homo sapiens
RTGACGTCAY
RTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.1
0.799
0.803
FOSL1
M04036_2.00
Homo sapiens
GTCAYCRRTGAC
GTCAYYGRTGAC
SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.2
0.799
0.803
FOSL1
M08071_2.00
Homo sapiens
DRTGASTCAKV
BMTGASTCAYH
ChIP-seq
Mathelier et al.(2014)
MA0477.1
0.799
0.803
FOSL1
M07833_2.00
Homo sapiens
NDRTGASTCAB
VTGASTCAYHN
ChIP-seq
Gerstein et al.(2012)
K562_FOSL1_HudsonAlpha
0.799
0.803
FOSL1
M08805_2.00
Homo sapiens
NVTGACTCABNN
NNVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL1_HUMAN.H11MO.0.A
0.799
0.803
Fosl1
M08821_2.00
Mus musculus
NVTGACTCABNN
NNVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL1_MOUSE.H11MO.0.A
0.799
0.803
FOSL1
M09490_2.00
Homo sapiens
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
BT549-Fra1_GSE46166
0.799
0.803
FOSL1
M10000_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOSL1_01
0.799
0.803
FOSL1
M10001_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q5
0.799
0.803
FOSL1
M10002_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q6_01
0.799
0.803
FOSL1
M10003_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q6
0.799
0.803
FOSL1
M04336_2.00
Homo sapiens
BRTGASTCATV
BATGASTCAYV
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_1
0.799
0.803
FOSL1
M04337_2.00
Homo sapiens
NRTSACGTCAYN
NRTGACGTSAYN
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_2
0.799
0.803
FOSL1
M04338_2.00
Homo sapiens
RATGAYRCR
YGYRTCATY
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_3
0.799
0.803
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.783
0.426
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000065427
bZIP
153
213
EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEF
Links
Other
bZIP
family TFs
Other
Rattus norvegicus
TFs
292 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G26110
Brachypodium distachyon
BRADI5G26110
N
Bra009346
Brassica rapa
Bra009346
I
PK13672.1
Cannabis sativa
PK13672.1
I
Cucsa.280970
Cucumis sativus
Cucsa.280970
I
GLYMA20G01450
Glycine max
GLYMA20G01450
I
GLYMA07G28310
Glycine max
GLYMA07G28310
I
Gorai.008G147400
Gossypium raimondii
Gorai.008G147400
I
Gorai.005G212900
Gossypium raimondii
Gorai.005G212900
I
LPERR04G25100
Leersia perrieri
LPERR04G25100
N
cassava18614.valid.m1
Manihot esculenta
cassava18614.valid.m1
I
GSMUA_Achr9G20620_001
Musa acuminata
GSMUA_Achr9G20620_001
I
GSMUA_Achr9G21870_001
Musa acuminata
GSMUA_Achr9G21870_001
N
GSMUA_Achr9G23760_001
Musa acuminata
GSMUA_Achr9G23760_001
I
OBART04G29570
Oryza barthii
OBART04G29570
N
OB04G36550
Oryza brachyantha
OB04G36550
N
ORGLA04G0258700
Oryza glaberrima
ORGLA04G0258700
N
OGLUM04G29490
Oryza glumaepatula
OGLUM04G29490
N
BGIOSGA014092
Oryza indica
BGIOSGA014092
N
OMERI04G25000
Oryza meridionalis
OMERI04G25000
N
ONIVA04G28100
Oryza nivara
ONIVA04G28100
N
OPUNC04G27130
Oryza punctata
OPUNC04G27130
N
ORUFI04G31270
Oryza rufipogon
ORUFI04G31270
N
OS04G0676700
Oryza sativa
OS04G0676700
N
Pavir.Ga00233
Panicum virgatum
Pavir.Ga00233
N
Pavir.Gb00055
Panicum virgatum
Pavir.Gb00055
N
gw1.13.182.1
Physcomitrella patens
gw1.13.182.1
N
30131.m007263
Ricinus communis
30131.m007263
I
SapurV1A.0234s0050
Salix purpurea
SapurV1A.0234s0050
I
SapurV1A.0333s0040
Salix purpurea
SapurV1A.0333s0040
I
Si022762m.g
Setaria italica
Si022762m.g
N
Sb06g032880
Sorghum bicolor
Sb06g032880
N
TCM_007672
Theobroma cacao
TCM_007672
I
VIT_10s0071g00660
Vitis vinifera
VIT_10s0071g00660
I
GRMZM2G149958
Zea mays
GRMZM2G149958
I