Carubv10022722m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10022722m.g T071592_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP17
M01778_2.00 		Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN		 PBM
Weirauch et al.(2014)
pTH7221 		0.904 0.984
TGA1B_TOBAC
M10083_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1B_01 		0.847 0.766
TGA1B_TOBAC
M10084_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1B_Q2 		0.847 0.766
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022722m bZIP 228 291

Links

Other bZIP family TFs
Other Capsella rubella TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10026 Aegilops tauschii F775_10026 I 0.783
F775_09858 Aegilops tauschii F775_09858 I 0.789
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.880
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.883
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.904
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I 0.854
BZIP17 Arabidopsis thaliana AT2G40950 D 0.904
BZIP49 Arabidopsis thaliana AT3G56660 I 0.846
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.904
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.807
Bo4g190610 Brassica oleracea Bo4g190610 I 0.844
Bo4g012880 Brassica oleracea Bo4g012880 I 0.878
Bra034147 Brassica rapa Bra034147 I 0.794
Bra023224 Brassica rapa Bra023224 I 0.794
Bra016959 Brassica rapa Bra016959 I 0.883
PK07115.1 Cannabis sativa PK07115.1 I 0.878
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.904
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.884
Ca_08103 Cicer arietinum Ca_08103 I 0.892
Cla017717 Citrullus lanatus Cla017717 I 0.877
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.870
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.870
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.877
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.880
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.904
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I 0.832
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.868
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.831
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.833
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.864
MLOC_42759 Hordeum vulgare MLOC_42759 I 0.783
MLOC_58500 Hordeum vulgare MLOC_58500 I 0.789
LPERR05G13000 Leersia perrieri LPERR05G13000 I 0.834
Lus10010440.g Linum usitatissimum Lus10010440.g I 0.904
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.904
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.865
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.865
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.893
MDP0000299504 Malus domestica MDP0000299504 I 0.852
MDP0000270677 Malus domestica MDP0000270677 I 0.855
MDP0000180785 Malus domestica MDP0000180785 I 0.855
MDP0000138811 Malus domestica MDP0000138811 I 0.852
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I 0.866
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.855
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.892
mgf013640m Mimulus guttatus mgf013640m I 0.859
mgf002378m Mimulus guttatus mgf002378m I 0.876
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.804
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I 0.833
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I 0.806
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D 0.847
OB05G24300 Oryza brachyantha OB05G24300 I 0.810
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I 0.834
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I 0.834
BGIOSGA018059 Oryza indica BGIOSGA018059 I 0.834
ONIVA05G17010 Oryza nivara ONIVA05G17010 I 0.834
OPUNC05G14460 Oryza punctata OPUNC05G14460 I 0.834
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I 0.834
BZIP39 Oryza sativa OS05G0411300 I 0.834
Pavir.J18543 Panicum virgatum Pavir.J18543 I 0.815
Pavir.J00385 Panicum virgatum Pavir.J00385 I 0.834
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I 0.798
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I 0.809
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.851
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.858
Pm016493 Prunus mume Pm016493 I 0.870
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.870
29940.m000398 Ricinus communis 29940.m000398 I 0.893
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I 0.869
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.869
Si021442m.g Setaria italica Si021442m.g I 0.834
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I 0.864
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I 0.864
Sb09g020320 Sorghum bicolor Sb09g020320 I 0.821
TCM_023889 Theobroma cacao TCM_023889 I 0.883
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I 0.789
TRIUR3_02784 Triticum urartu TRIUR3_02784 I 0.783
TRIUR3_00571 Triticum urartu TRIUR3_00571 I 0.789
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.880
GRMZM2G045236 Zea mays GRMZM2G045236 I 0.834