Pavir.J04905 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J04905 T072445_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.797 0.824
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.797 0.824
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.797 0.824
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.785 0.765
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.785 0.765
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.785 0.765
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.785 0.765
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.785 0.765
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.785 0.765
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.785 0.765
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.785 0.765
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.785 0.765
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.785 0.765
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.785 0.765
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.785 0.765
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.785 0.765
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.785 0.745
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04905.1.p bZIP 151 201
Pavir.J04905.2.p bZIP 151 178
Pavir.J04905.3.p bZIP 110 160

Links

Other bZIP family TFs
Other Panicum virgatum TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N
ENSAMEG00000011652 Ailuropoda melanoleuca ENSAMEG00000011652 N
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
ENSBTAP00000052990-D1 Bos grunniens ENSBTAP00000052990-D1 N
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N
HMGB1 Bos taurus ENSBTAG00000014862 N
ENSBTAG00000015315 Bos taurus ENSBTAG00000015315 N
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
ENSCJAG00000003900 Callithrix jacchus ENSCJAG00000003900 N
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I
ENSCJAG00000007044 Callithrix jacchus ENSCJAG00000007044 N
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N
ENSCJAG00000007594 Callithrix jacchus ENSCJAG00000007594 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000010744 Callithrix jacchus ENSCJAG00000010744 N
ENSCJAG00000011146 Callithrix jacchus ENSCJAG00000011146 N
ENSCJAG00000014197 Callithrix jacchus ENSCJAG00000014197 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N
ENSCJAG00000014991 Callithrix jacchus ENSCJAG00000014991 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N
CapteG158220 Capitella teleta CapteG158220 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
ENSCSAG00000001500 Chlorocebus sabaeus ENSCSAG00000001500 N
ENSCSAG00000010707 Chlorocebus sabaeus ENSCSAG00000010707 N
ENSCSAG00000012719 Chlorocebus sabaeus ENSCSAG00000012719 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N
ENSCSAG00000017502 Chlorocebus sabaeus ENSCSAG00000017502 N
ENSCHOG00000001924 Choloepus hoffmanni ENSCHOG00000001924 N
hmg1/2 Ciona intestinalis ENSCING00000004075 N
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N
CPIJ014043 Culex quinquefasciatus CPIJ014043 N
hmgb3b Danio rerio ENSDARG00000006408 N
hmgb2a Danio rerio ENSDARG00000029722 N
hmgb1a Danio rerio ENSDARG00000099175 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSDNOG00000033430 Dasypus novemcinctus ENSDNOG00000033430 N
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N
ENSDNOG00000042649 Dasypus novemcinctus ENSDNOG00000042649 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N
ENSETEG00000013458 Echinops telfairi ENSETEG00000013458 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N
ENSGGOG00000007804 Gorilla gorilla ENSGGOG00000007804 N
ENSGGOG00000023265 Gorilla gorilla ENSGGOG00000023265 N
ENSGGOG00000023427 Gorilla gorilla ENSGGOG00000023427 N
ENSGGOG00000025109 Gorilla gorilla ENSGGOG00000025109 N
ENSGGOG00000025145 Gorilla gorilla ENSGGOG00000025145 N
ENSGGOG00000025769 Gorilla gorilla ENSGGOG00000025769 N
HMGB1 Gorilla gorilla ENSGGOG00000026606 N
ENSGGOG00000026945 Gorilla gorilla ENSGGOG00000026945 N
ENSGGOG00000027139 Gorilla gorilla ENSGGOG00000027139 N
HelroG157726 Helobdella robusta HelroG157726 N
HelroG157878 Helobdella robusta HelroG157878 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
ISCW017350 Ixodes scapularis ISCW017350 N
LotgiG200052 Lottia gigantea LotgiG200052 N
ENSLAFG00000030388 Loxodonta africana ENSLAFG00000030388 N
ENSMMUP00000003419 Macaca fascicularis ENSMMUP00000003419 N
ENSMMUP00000010196 Macaca fascicularis ENSMMUP00000010196 N
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
ENSMMUG00000002541 Macaca mulatta ENSMMUG00000002541 I
ENSMMUG00000002662 Macaca mulatta ENSMMUG00000002662 N
ENSMMUG00000007761 Macaca mulatta ENSMMUG00000007761 N
ENSMMUG00000010106 Macaca mulatta ENSMMUG00000010106 I
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
ENSMEUG00000009480 Macropus eugenii ENSMEUG00000009480 N
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N
ENSMEUG00000016024 Macropus eugenii ENSMEUG00000016024 N
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
ENSMICG00000000573 Microcebus murinus ENSMICG00000000573 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
ENSMICG00000010120 Microcebus murinus ENSMICG00000010120 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
ENSMPUG00000000121 Mustela putorius furo ENSMPUG00000000121 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N
NV15664 Nasonia vitripennis NV15664 N
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N
hmgb1a Oryzias latipes ENSORLG00000003400 N
hmgb2b Oryzias latipes ENSORLG00000018687 N
ENSOGAG00000006589 Otolemur garnettii ENSOGAG00000006589 N
ENSOGAG00000007401 Otolemur garnettii ENSOGAG00000007401 N
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N
ENSOGAG00000024497 Otolemur garnettii ENSOGAG00000024497 N
ENSOGAG00000027183 Otolemur garnettii ENSOGAG00000027183 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000028737 Otolemur garnettii ENSOGAG00000028737 N
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N
ENSOGAG00000033253 Otolemur garnettii ENSOGAG00000033253 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000033550 Otolemur garnettii ENSOGAG00000033550 N
ENSOGAG00000033658 Otolemur garnettii ENSOGAG00000033658 N
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N
ENSOARG00000002938 Ovis aries ENSOARG00000002938 N
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSOARG00000019147 Ovis aries ENSOARG00000019147 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPANG00000020000 Papio anubis ENSPANG00000020000 N
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N
ENSPANG00000025478 Papio anubis ENSPANG00000025478 N
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
ENSPPYG00000020229 Pongo abelii ENSPPYG00000020229 N
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N
AABR07060165.1 Rattus norvegicus ENSRNOG00000048544 N
AABR07060287.1 Rattus norvegicus ENSRNOG00000049746 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N
SMU15016767 Schmidtea mediterranea SMU15016767 N
SMAR013695 Strigamia maritima SMAR013695 N
HMGB2 Sus scrofa ENSSSCG00000009704 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
hmgb1b Takifugu rubripes ENSTRUG00000004822 N
hmgb2b Takifugu rubripes ENSTRUG00000005015 N
hmgb1a Takifugu rubripes ENSTRUG00000008452 N
ENSTSYG00000003868 Tarsius syrichta ENSTSYG00000003868 N
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N
tetur02g08260 Tetranychus urticae tetur02g08260 N
tetur02g08340 Tetranychus urticae tetur02g08340 N
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N
ENSTBEG00000005706 Tupaia belangeri ENSTBEG00000005706 N
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N
ENSTBEG00000013375 Tupaia belangeri ENSTBEG00000013375 N
ENSTBEG00000013995 Tupaia belangeri ENSTBEG00000013995 N
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N
ENSTBEG00000017117 Tupaia belangeri ENSTBEG00000017117 N
AAC59859 Xenopus laevis AAC59859 N
AAH44009 Xenopus laevis AAH44009 N
AAH73449 Xenopus laevis AAH73449 N
BAA06440 Xenopus laevis BAA06440 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N
AAI68534 Xenopus tropicalis AAI68534 N
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N