ACEP27848 (Atta cephalotes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACEP27848 T079561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.805 0.913
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.805 0.913
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.805 0.913
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.805 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP27848-PA C2H2 ZF 434 457
ACEP27848-PA C2H2 ZF 470 492
ACEP27848-PA C2H2 ZF 498 520
ACEP27848-PA C2H2 ZF 526 548

Links

Other C2H2 ZF family TFs
Other Atta cephalotes TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G23060 Brachypodium distachyon BRADI1G23060 N
MLOC_62665 Hordeum vulgare MLOC_62665 N
LPERR07G17740 Leersia perrieri LPERR07G17740 N
GSMUA_Achr1G22470_001 Musa acuminata GSMUA_Achr1G22470_001 N
GSMUA_Achr4G16460_001 Musa acuminata GSMUA_Achr4G16460_001 N
GSMUA_Achr8G30950_001 Musa acuminata GSMUA_Achr8G30950_001 N
OBART07G20430 Oryza barthii OBART07G20430 N
OB03G31410 Oryza brachyantha OB03G31410 N
OB07G26110 Oryza brachyantha OB07G26110 N
ORGLA07G0156800 Oryza glaberrima ORGLA07G0156800 N
ORGLA03G0208800 Oryza glaberrima ORGLA03G0208800 N
OGLUM07G20210 Oryza glumaepatula OGLUM07G20210 N
OGLUM03G23190 Oryza glumaepatula OGLUM03G23190 N
SHR1 Oryza indica BGIOSGA026037 N
SHR2 Oryza indica BGIOSGA010480 N
OMERI03G20220 Oryza meridionalis OMERI03G20220 N
OMERI07G17100 Oryza meridionalis OMERI07G17100 N
ONIVA07G18840 Oryza nivara ONIVA07G18840 N
ONIVA03G24000 Oryza nivara ONIVA03G24000 N
OPUNC03G21050 Oryza punctata OPUNC03G21050 N
OPUNC07G19280 Oryza punctata OPUNC07G19280 N
ORUFI07G21310 Oryza rufipogon ORUFI07G21310 N
SHR2 Oryza sativa OS03G0433200 N
SHR1 Oryza sativa OS07G0586900 N
Pavir.Ib01878 Panicum virgatum Pavir.Ib01878 N
Pavir.Ia02979 Panicum virgatum Pavir.Ia02979 N
Pavir.Bb01182 Panicum virgatum Pavir.Bb01182 N
Pavir.Ba01071 Panicum virgatum Pavir.Ba01071 N
Si029296m.g Setaria italica Si029296m.g N
Si034653m.g Setaria italica Si034653m.g N
Sb02g037890 Sorghum bicolor Sb02g037890 N
Traes_2AS_D0B21BF981 Triticum aestivum Traes_2AS_D0B21BF981 N
Traes_2BS_736EF207B1 Triticum aestivum Traes_2BS_736EF207B1 N
Traes_2DS_3B4535629 Triticum aestivum Traes_2DS_3B4535629 N
TRIUR3_26966 Triticum urartu TRIUR3_26966 N
GRMZM2G019060 Zea mays GRMZM2G019060 N
GRMZM2G132794 Zea mays GRMZM2G132794 N
GRMZM2G172657 Zea mays GRMZM2G172657 N