CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G172657
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G172657
T200313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G172657_P01
GRAS
186
591
ASQLLLECARAVAGRDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASPEPQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSSAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAGLDLDALDLRDGGATTALAINCVNSLRGVVPGGARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPGAPEESGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSSGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWR
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g037890
Sorghum bicolor
Sb02g037890
N
0.978
Si029296m.g
Setaria italica
Si029296m.g
N
0.967
Pavir.Ba01071
Panicum virgatum
Pavir.Ba01071
N
0.967
LPERR07G17740
Leersia perrieri
LPERR07G17740
N
0.959
OGLUM07G20210
Oryza glumaepatula
OGLUM07G20210
N
0.959
ORUFI07G21310
Oryza rufipogon
ORUFI07G21310
N
0.959
SHR1
Oryza sativa
OS07G0586900
N
0.959
SHR1
Oryza indica
BGIOSGA026037
N
0.957
GRMZM2G019060
Zea mays
GRMZM2G019060
N
0.957
OMERI07G17100
Oryza meridionalis
OMERI07G17100
N
0.957
ONIVA07G18840
Oryza nivara
ONIVA07G18840
N
0.957
OPUNC07G19280
Oryza punctata
OPUNC07G19280
N
0.957
ORGLA07G0156800
Oryza glaberrima
ORGLA07G0156800
N
0.957
Pavir.Bb01182
Panicum virgatum
Pavir.Bb01182
N
0.954
TRIUR3_26966
Triticum urartu
TRIUR3_26966
N
0.943
Traes_2BS_736EF207B1
Triticum aestivum
Traes_2BS_736EF207B1
N
0.938
MLOC_62665
Hordeum vulgare
MLOC_62665
N
0.930
BRADI1G23060
Brachypodium distachyon
BRADI1G23060
N
0.904
SHR2
Oryza indica
BGIOSGA010480
N
0.888
OBART07G20430
Oryza barthii
OBART07G20430
N
0.888
OGLUM03G23190
Oryza glumaepatula
OGLUM03G23190
N
0.888
OMERI03G20220
Oryza meridionalis
OMERI03G20220
N
0.888
ONIVA03G24000
Oryza nivara
ONIVA03G24000
N
0.888
ORGLA03G0208800
Oryza glaberrima
ORGLA03G0208800
N
0.888
ORUFI03G23130
Oryza rufipogon
ORUFI03G23130
N
0.888
Traes_2AS_D0B21BF981
Triticum aestivum
Traes_2AS_D0B21BF981
N
0.887
SHR2
Oryza sativa
OS03G0433200
N
0.885
GRMZM2G132794
Zea mays
GRMZM2G132794
N
0.883
Pavir.Ia02979
Panicum virgatum
Pavir.Ia02979
N
0.883
Si034653m.g
Setaria italica
Si034653m.g
N
0.878
OB03G31410
Oryza brachyantha
OB03G31410
N
0.877
OPUNC03G21050
Oryza punctata
OPUNC03G21050
N
0.877
Traes_2DS_3B4535629
Triticum aestivum
Traes_2DS_3B4535629
N
0.867
Pavir.Ib01878
Panicum virgatum
Pavir.Ib01878
N
0.855
OB07G26110
Oryza brachyantha
OB07G26110
N
0.832
GSMUA_Achr8G30950_001
Musa acuminata
GSMUA_Achr8G30950_001
N
0.799
GSMUA_Achr1G22470_001
Musa acuminata
GSMUA_Achr1G22470_001
N
0.780
GSMUA_Achr4G16460_001
Musa acuminata
GSMUA_Achr4G16460_001
N
0.764