CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr8G30950_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr8G30950_001
T200402_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P30950_001
GRAS
134
529
SSQLLIECARAVAARDSHRVQQLMWMLNELSSPYGDTEQKLAAYFLQGFFARLTSSGPRTLRTLSAASDRNCSFDSTRRTALRFQELSPWSSFGHVAANGAILEAFLDPSSASQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVWSASPSTAVQTVMREIGQRMEKFARLMGVPFRFNVVHHAGDLSDLDLDTLDLREGDSSSLAVNCINALHGVSPANRRRETLIAAIRRLQPRIVTVVEEEADLEGGGGGGGEEEGEAFFKVFKESLRFFSAYFESLEESFPRTSNERLALEREAGRSVVDLVACPAAESAERRDTAAGWSRRMRSAGFAPAAFSEDVADDVRALLRRYKEGWTMRPTAEDSEDASAGIFLEWKEKPVVWASAWK
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr1G22470_001
Musa acuminata
GSMUA_Achr1G22470_001
N
0.856
GSMUA_Achr4G16460_001
Musa acuminata
GSMUA_Achr4G16460_001
N
0.812
GRMZM2G172657
Zea mays
GRMZM2G172657
N
0.799
LPERR07G17740
Leersia perrieri
LPERR07G17740
N
0.799
OPUNC07G19280
Oryza punctata
OPUNC07G19280
N
0.799
Sb02g037890
Sorghum bicolor
Sb02g037890
N
0.799
Si029296m.g
Setaria italica
Si029296m.g
N
0.799
OGLUM07G20210
Oryza glumaepatula
OGLUM07G20210
N
0.796
ORUFI07G21310
Oryza rufipogon
ORUFI07G21310
N
0.796
SHR1
Oryza sativa
OS07G0586900
N
0.796
OMERI03G20220
Oryza meridionalis
OMERI03G20220
N
0.795
OMERI07G17100
Oryza meridionalis
OMERI07G17100
N
0.794
SHR1
Oryza indica
BGIOSGA026037
N
0.793
ONIVA07G18840
Oryza nivara
ONIVA07G18840
N
0.793
ORGLA07G0156800
Oryza glaberrima
ORGLA07G0156800
N
0.793
Pavir.Bb01182
Panicum virgatum
Pavir.Bb01182
N
0.793
Pavir.Ba01071
Panicum virgatum
Pavir.Ba01071
N
0.791
SHR2
Oryza indica
BGIOSGA010480
N
0.788
MLOC_62665
Hordeum vulgare
MLOC_62665
N
0.788
OB03G31410
Oryza brachyantha
OB03G31410
N
0.788
OGLUM03G23190
Oryza glumaepatula
OGLUM03G23190
N
0.788
ONIVA03G24000
Oryza nivara
ONIVA03G24000
N
0.788
ORGLA03G0208800
Oryza glaberrima
ORGLA03G0208800
N
0.788
ORUFI03G23130
Oryza rufipogon
ORUFI03G23130
N
0.788
SHR2
Oryza sativa
OS03G0433200
N
0.785
OPUNC03G21050
Oryza punctata
OPUNC03G21050
N
0.783
Traes_2BS_736EF207B1
Triticum aestivum
Traes_2BS_736EF207B1
N
0.783
GRMZM2G019060
Zea mays
GRMZM2G019060
N
0.780
BRADI1G23060
Brachypodium distachyon
BRADI1G23060
N
0.779
GRMZM2G132794
Zea mays
GRMZM2G132794
N
0.766
Si034653m.g
Setaria italica
Si034653m.g
N
0.764
Pavir.Ia02979
Panicum virgatum
Pavir.Ia02979
N
0.764
OBART07G20430
Oryza barthii
OBART07G20430
N
0.723
Pavir.Ib01878
Panicum virgatum
Pavir.Ib01878
N
0.701