Pavir.Ia02979 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ia02979 T203025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia02979.1.p GRAS 221 629
Pavir.Ia02979.2.p GRAS 219 627

Links

Other GRAS family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si034653m.g Setaria italica Si034653m.g N 0.949
GRMZM2G132794 Zea mays GRMZM2G132794 N 0.940
OB03G31410 Oryza brachyantha OB03G31410 N 0.897
GRMZM2G172657 Zea mays GRMZM2G172657 N 0.883
SHR2 Oryza indica BGIOSGA010480 N 0.881
OGLUM03G23190 Oryza glumaepatula OGLUM03G23190 N 0.881
OMERI03G20220 Oryza meridionalis OMERI03G20220 N 0.881
ONIVA03G24000 Oryza nivara ONIVA03G24000 N 0.881
ORGLA03G0208800 Oryza glaberrima ORGLA03G0208800 N 0.881
ORUFI03G23130 Oryza rufipogon ORUFI03G23130 N 0.881
SHR2 Oryza sativa OS03G0433200 N 0.878
Sb02g037890 Sorghum bicolor Sb02g037890 N 0.878
LPERR07G17740 Leersia perrieri LPERR07G17740 N 0.873
OGLUM07G20210 Oryza glumaepatula OGLUM07G20210 N 0.873
OPUNC03G21050 Oryza punctata OPUNC03G21050 N 0.873
ORUFI07G21310 Oryza rufipogon ORUFI07G21310 N 0.873
SHR1 Oryza sativa OS07G0586900 N 0.873
Si029296m.g Setaria italica Si029296m.g N 0.873
Pavir.Ba01071 Panicum virgatum Pavir.Ba01071 N 0.873
Pavir.Ib01878 Panicum virgatum Pavir.Ib01878 N 0.873
SHR1 Oryza indica BGIOSGA026037 N 0.870
GRMZM2G019060 Zea mays GRMZM2G019060 N 0.870
OMERI07G17100 Oryza meridionalis OMERI07G17100 N 0.870
ONIVA07G18840 Oryza nivara ONIVA07G18840 N 0.870
ORGLA07G0156800 Oryza glaberrima ORGLA07G0156800 N 0.870
OPUNC07G19280 Oryza punctata OPUNC07G19280 N 0.867
Pavir.Bb01182 Panicum virgatum Pavir.Bb01182 N 0.867
Traes_2BS_736EF207B1 Triticum aestivum Traes_2BS_736EF207B1 N 0.854
MLOC_62665 Hordeum vulgare MLOC_62665 N 0.848
BRADI1G23060 Brachypodium distachyon BRADI1G23060 N 0.824
OBART07G20430 Oryza barthii OBART07G20430 N 0.808
GSMUA_Achr8G30950_001 Musa acuminata GSMUA_Achr8G30950_001 N 0.764
OB07G26110 Oryza brachyantha OB07G26110 N 0.753
GSMUA_Achr1G22470_001 Musa acuminata GSMUA_Achr1G22470_001 N 0.748
GSMUA_Achr4G16460_001 Musa acuminata GSMUA_Achr4G16460_001 N 0.734