Bra020571 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra020571 T081933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra020571.1-P C2H2 ZF 32 54

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00415 Aegilops tauschii F775_00415 N
F775_14938 Aegilops tauschii F775_14938 N
F775_30638 Aegilops tauschii F775_30638 I
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N
Bra024197 Brassica rapa Bra024197 I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
PK28347.1 Cannabis sativa PK28347.1 I
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I
Ca_06348 Cicer arietinum Ca_06348 I
Ca_23230 Cicer arietinum Ca_23230 N
Cla004701 Citrullus lanatus Cla004701 I
Cla020673 Citrullus lanatus Cla020673 I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.046530 Cucumis sativus Cucsa.046530 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA05G09110 Glycine max GLYMA05G09110 I
GLYMA13G30800 Glycine max GLYMA13G30800 I
GLYMA15G08480 Glycine max GLYMA15G08480 I
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G00640 Glycine max GLYMA19G00640 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
GLYMA20G32690 Glycine max GLYMA20G32690 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I
LPERR02G18380 Leersia perrieri LPERR02G18380 N
LPERR05G05170 Leersia perrieri LPERR05G05170 I
Lus10003668.g Linum usitatissimum Lus10003668.g N
Lus10018637.g Linum usitatissimum Lus10018637.g I
Lus10021708.g Linum usitatissimum Lus10021708.g I
Lus10039873.g Linum usitatissimum Lus10039873.g I
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I
MDP0000283975 Malus domestica MDP0000283975 N
MDP0000663564 Malus domestica MDP0000663564 I
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava17166.m1 Manihot esculenta cassava17166.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
cassava46566.m1 Manihot esculenta cassava46566.m1 I
MTR_1g093670 Medicago truncatula MTR_1g093670 I
MTR_2g014680 Medicago truncatula MTR_2g014680 I
MTR_4g088245 Medicago truncatula MTR_4g088245 I
MTR_7g033320 Medicago truncatula MTR_7g033320 I
MTR_8g069160 Medicago truncatula MTR_8g069160 I
mgf018486m Mimulus guttatus mgf018486m I
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I
OBART02G22660 Oryza barthii OBART02G22660 N
OBART04G16110 Oryza barthii OBART04G16110 N
OBART05G06140 Oryza barthii OBART05G06140 I
OB02G30060 Oryza brachyantha OB02G30060 N
OB05G15600 Oryza brachyantha OB05G15600 I
OB06G19430 Oryza brachyantha OB06G19430 I
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I
BGIOSGA006133 Oryza indica BGIOSGA006133 N
BGIOSGA014881 Oryza indica BGIOSGA014881 N
BGIOSGA018654 Oryza indica BGIOSGA018654 I
OLONG_005904 Oryza longistaminata OLONG_005904 N
OLONG_014922 Oryza longistaminata OLONG_014922 I
OLONG_021085 Oryza longistaminata OLONG_021085 I
OLONG_021848 Oryza longistaminata OLONG_021848 N
OMERI01G02010 Oryza meridionalis OMERI01G02010 N
OMERI02G22200 Oryza meridionalis OMERI02G22200 N
ONIVA02G25300 Oryza nivara ONIVA02G25300 N
ONIVA04G14230 Oryza nivara ONIVA04G14230 N
ONIVA05G06750 Oryza nivara ONIVA05G06750 I
OPUNC02G20570 Oryza punctata OPUNC02G20570 N
OPUNC04G13980 Oryza punctata OPUNC04G13980 N
OPUNC05G05600 Oryza punctata OPUNC05G05600 I
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I
OS02G0594800 Oryza sativa OS02G0594800 N
OS05G0194500 Oryza sativa OS05G0194500 I
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I
Pavir.Ga02265 Panicum virgatum Pavir.Ga02265 I
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I
Pavir.J05241 Panicum virgatum Pavir.J05241 I
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I
Pm015625 Prunus mume Pm015625 I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I
29738.m001046 Ricinus communis 29738.m001046 I
29917.m002016 Ricinus communis 29917.m002016 I
29983.m003125 Ricinus communis 29983.m003125 I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I
Si002301m.g Setaria italica Si002301m.g I
Si006639m.g Setaria italica Si006639m.g I
Si012740m.g Setaria italica Si012740m.g N
Si017393m.g Setaria italica Si017393m.g I
Si019444m.g Setaria italica Si019444m.g I
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I
Sb03g030750 Sorghum bicolor Sb03g030750 I
Sb04g024780 Sorghum bicolor Sb04g024780 N
Sb06g020103 Sorghum bicolor Sb06g020103 I
TCM_008229 Theobroma cacao TCM_008229 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N
Traes_2DL_AE270CBAA1 Triticum aestivum Traes_2DL_AE270CBAA1 N
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I
TRIUR3_27393 Triticum urartu TRIUR3_27393 I
SOG1 Vitis vinifera VIT_01s0011g02990 I
ANAC073 Vitis vinifera VIT_12s0028g03050 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I
GRMZM2G038073 Zea mays GRMZM2G038073 N
GRMZM2G104078 Zea mays GRMZM2G104078 N
GRMZM2G450445 Zea mays GRMZM2G450445 N