Bra020571 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra020571 T081933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra020571.1-P C2H2 ZF 32 54

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g155500 Brassica oleracea Bo2g155500 N 0.779
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.779
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.779
30076.m004693 Ricinus communis 30076.m004693 I 0.774
SapurV1A.0052s0050 Salix purpurea SapurV1A.0052s0050 I 0.774
Ca_08116 Cicer arietinum Ca_08116 I 0.767
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.766
Ca_23376 Cicer arietinum Ca_23376 N 0.766
GIS2 Arabidopsis thaliana AT5G06650 I 0.765
Bo2g007320 Brassica oleracea Bo2g007320 I 0.765
Bra028724 Brassica rapa Bra028724 I 0.765
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.765
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.765
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.765
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.765
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.765
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.765
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.765
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.765
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.765
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.764
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.762
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.762
Pm008291 Prunus mume Pm008291 I 0.762
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.762
MDP0000121370 Malus domestica MDP0000121370 I 0.762
MDP0000165710 Malus domestica MDP0000165710 I 0.762
Si028367m.g Setaria italica Si028367m.g I 0.757
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.757
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.757