Bostr.29827s0107 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.29827s0107 T142614_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.29827s0107.1.p C2H2 ZF 76 98

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g155500 Brassica oleracea Bo2g155500 N 0.827
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.827
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.802
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.802
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.802
OB09G17800 Oryza brachyantha OB09G17800 I 0.802
OBART09G11250 Oryza barthii OBART09G11250 I 0.802
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.802
OLONG_006424 Oryza longistaminata OLONG_006424 I 0.802
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.802
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.802
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.802
ORGLA09G0084000 Oryza glaberrima ORGLA09G0084000 I 0.802
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.802
OS09G0431900 Oryza sativa OS09G0431900 I 0.802
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.802
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.802
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.802
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.802
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.800
Bra020571 Brassica rapa Bra020571 N 0.779
30076.m004693 Ricinus communis 30076.m004693 I 0.774
SapurV1A.0052s0050 Salix purpurea SapurV1A.0052s0050 I 0.774
Ca_08116 Cicer arietinum Ca_08116 I 0.767
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.766
Ca_23376 Cicer arietinum Ca_23376 N 0.766
GIS2 Arabidopsis thaliana AT5G06650 I 0.765
Bo2g007320 Brassica oleracea Bo2g007320 I 0.765
Bra028724 Brassica rapa Bra028724 I 0.765
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.765
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.765
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.765
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.765
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.765
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.765
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.765
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.765
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.765
F775_05447 Aegilops tauschii F775_05447 N 0.764
MLOC_38864 Hordeum vulgare MLOC_38864 N 0.764
TRIUR3_30765 Triticum urartu TRIUR3_30765 N 0.764
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.764
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.762
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.762
Pm008291 Prunus mume Pm008291 I 0.762
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.762
MDP0000121370 Malus domestica MDP0000121370 I 0.762
MDP0000165710 Malus domestica MDP0000165710 I 0.762
Si028367m.g Setaria italica Si028367m.g I 0.757
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.757
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.757