CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BRADI1G22940
(
Brachypodium distachyon
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BRADI1G22940
T081987_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G22940.1
C2H2 ZF
102
124
YECSVCGKVYASYQALGGHKTSH
BRADI1G22940.1
C2H2 ZF
154
176
HRCSLCLRTFPSGQALGGHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Brachypodium distachyon
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.757
LPERR07G17860
Leersia perrieri
LPERR07G17860
N
0.792
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
0.772
OB03G42170
Oryza brachyantha
OB03G42170
I
0.772
BGIOSGA026045
Oryza indica
BGIOSGA026045
N
0.821
ONIVA07G18980
Oryza nivara
ONIVA07G18980
N
0.821
ORUFI07G21440
Oryza rufipogon
ORUFI07G21440
N
0.821
OS07G0588600
Oryza sativa
OS07G0588600
N
0.821
Pavir.J15304
Panicum virgatum
Pavir.J15304
N
0.803
Pavir.J16973
Panicum virgatum
Pavir.J16973
N
0.803
29661.m000908
Ricinus communis
29661.m000908
I
0.758
Sb02g038000
Sorghum bicolor
Sb02g038000
N
0.803
Traes_2BS_DD07C2EE6
Triticum aestivum
Traes_2BS_DD07C2EE6
N
0.803
GRMZM2G089557
Zea mays
GRMZM2G089557
N
0.821