ZNF554 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000026098 T096604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF554
M08341_2.00 		Homo sapiens
CHGRGYCANNYRGDKDRCHNN
NNDGYHMHCYRNNTGRCYCDG		 ChIP-seq
Schmitges et al.(2016)
Q86TJ5_1-7.RCADE 		0.820 0.994
ZNF554
M08917_2.00 		Homo sapiens
RCDGRGYCANNBRGDDDRCN
NGYHHHCYVNNTGRCYCHGY		 Misc
Kulakovskiy et al.(2013)
ZN554_HUMAN.H11MO.0.C 		0.820 0.994
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000017486 C2H2 ZF 324 346
ENSGGOP00000017486 C2H2 ZF 352 374
ENSGGOP00000017486 C2H2 ZF 380 402
ENSGGOP00000017486 C2H2 ZF 408 430
ENSGGOP00000017486 C2H2 ZF 436 458
ENSGGOP00000017486 C2H2 ZF 464 486
ENSGGOP00000017486 C2H2 ZF 492 514

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08649 Acanthocheilonema viteae nAv.1.0.1.g08649 I
ANCCAN_04748 Ancylostoma caninum ANCCAN_04748 I
ANCCEY_09710 Ancylostoma ceylanicum ANCCEY_09710 I
Bm5937 Brugia malayi Bm5937 I
BTMF_0000940801 Brugia timori BTMF_0000940801 I
BXY_0544800 Bursaphelenchus xylophilus BXY_0544800 I
CBN09492 Caenorhabditis brenneri CBN09492 I
CBN29810 Caenorhabditis brenneri CBN29810 I
CBG01382 Caenorhabditis briggsae CBG01382 I
dmd-8 Caenorhabditis elegans WBGene00020708 D
CJA09451 Caenorhabditis japonica CJA09451 I
CRE08815 Caenorhabditis remanei CRE08815 I
DICVIV_01396 Dictyocaulus viviparus DICVIV_01396 I
EVEC_0001219101 Enterobius vermicularis EVEC_0001219101 I
GPLIN_001033000 Globodera pallida GPLIN_001033000 N
HPLM_0000403401 Haemonchus placei HPLM_0000403401 I
HPBE_0001572101 Heligmosomoides bakeri HPBE_0001572101 I
Hba_11006 Heterorhabditis bacteriophora Hba_11006 I
LOAG_04009 Loa loa LOAG_04009 I
maker-nMf.1.1.scaf00497-augustus-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf00497-augustus-gene-0.10 N
MhA1_Contig1499.frz3.gene12 Meloidogyne hapla MhA1_Contig1499.frz3.gene12 N
NECAME_09584 Necator americanus NECAME_09584 I
WBGene00243680 Onchocerca volvulus WBGene00243680 N
PTRK_0000045900 Parastrongyloides trichosuri PTRK_0000045900 I
scaffold1063-EXSNAP2012.7 Pristionchus exspectatus scaffold1063-EXSNAP2012.7 I
PPA14239 Pristionchus pacificus PPA14239 I
RSKR_0000332900 Rhabditophanes kr3021 RSKR_0000332900 N
L596_g1691 Steinernema carpocapsae L596_g1691 I
L889_g31510 Steinernema feltiae L889_g31510 I
L893_g13923 Steinernema glaseri L893_g13923 I
L892_g20637 Steinernema scapterisci L892_g20637 I
SPAL_0000741800 Strongyloides papillosus SPAL_0000741800 I
SVE_1023400 Strongyloides venezuelensis SVE_1023400 I
SVUK_0000327101 Strongylus vulgaris SVUK_0000327101 I
TELCIR_22084 Teladorsagia circumcincta TELCIR_22084 I
TCLT_0000991301 Thelazia callipaeda TCLT_0000991301 N