GFI1B (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000005948 T099206_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gfi1b
M08098_2.00 		Mus musculus
MAATCWCWGCH
DGCWGWGATTK		 ChIP-seq
Mathelier et al.(2014)
MA0483.1 		0.817 0.993
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.789 0.859
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.789 0.859
Gfi1b
M08977_2.00 		Mus musculus
MAAYCACWGH
DCWGWGRTTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A 		0.817 0.993
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.789 0.859
Gfi1b
M09514_2.00 		Mus musculus
MAATCWSWGC
GCWSWGATTK		 Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178 		0.817 0.993
GFI1B
M00240_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_REF 		0.815 0.986
GFI1B
M04523_2.00 		Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX 		0.815 0.986
GFI1B
M08909_2.00 		Homo sapiens
MAATCWSDGY
RCHSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A 		0.815 0.986
GFI1B
M10243_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_01 		0.815 0.986
GFI1B
M10244_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_Q6 		0.815 0.986
GFI1B
M00239_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_A204T 		0.815 0.986
GFI1B
M04524_2.00 		Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX 		0.815 0.986
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.782 0.833
GFI1
M00238_2.00 		Homo sapiens
NWAWMNNNN
NNNNKWTWN		 PBM
Barrera et al.(2016)
GFI1_REF 		0.771 0.870
GFI1
M04507_2.00 		Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV		 SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX 		0.771 0.870
Gfi1
M02668_2.00 		Rattus norvegicus
NMAATCWVHS
SDBWGATTKN		 SELEX
Mathelier et al.(2014)
MA0038.1 		0.771 0.870
GFI1
M08905_2.00 		Homo sapiens
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C 		0.771 0.870
Gfi1
M08984_2.00 		Mus musculus
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C 		0.771 0.870
GFI1
M10235_2.00 		Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN		 Transfac
Matys et al.(2006)
V$GFI1_01 		0.771 0.870
GFI1
M10236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1_Q6_01 		0.771 0.870
GFI1
M04508_2.00 		Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN		 SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX 		0.771 0.870
GFI1
M00236_2.00 		Homo sapiens
NAATMNNNN
NNNNKATTN		 PBM
Barrera et al.(2016)
GFI1_L400F 		0.769 0.862
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000006718 C2H2 ZF 174 196
ENSMMUP00000006718 C2H2 ZF 202 224
ENSMMUP00000006718 C2H2 ZF 230 252
ENSMMUP00000006718 C2H2 ZF 258 281
ENSMMUP00000007826 C2H2 ZF 163 186
ENSMMUP00000007826 C2H2 ZF 192 214
ENSMMUP00000007826 C2H2 ZF 220 242
ENSMMUP00000007826 C2H2 ZF 248 270
ENSMMUP00000007826 C2H2 ZF 276 298
ENSMMUP00000007826 C2H2 ZF 304 327

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I 0.807
AAEL000869 Aedes aegypti AAEL000869 I 0.797
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I 0.771
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I 0.774
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I 0.802
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I 0.774
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I 0.791
GFI1 Anolis carolinensis ENSACAG00000004498 I 0.772
AATE011452 Anopheles atroparvus AATE011452 I 0.797
ACOM022805 Anopheles coluzzii ACOM022805 I 0.797
ADIR005637 Anopheles dirus ADIR005637 I 0.797
AFAF000823 Anopheles farauti AFAF000823 I 0.797
AGAP010926 Anopheles gambiae AGAP010926 I 0.797
AMEC011115 Anopheles melas AMEC011115 I 0.797
AMEM009379 Anopheles merus AMEM009379 I 0.797
ASTEI06414 Anopheles stephensi ASTEI06414 I 0.797
GB48486 Apis mellifera GB48486 I 0.785
Afo_R001655 Aptenodytes forsteri Afo_R001655 I 0.802
Afo_R006147 Aptenodytes forsteri Afo_R006147 I 0.774
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I 0.774
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I 0.792
BGIBMGA003190 Bombyx mori BGIBMGA003190 I 0.797
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I 0.824
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I 0.767
GFI1B Bos taurus ENSBTAG00000012772 I 0.824
GFI1 Bos taurus ENSBTAG00000016723 I 0.771
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I 0.764
Bm9493 Brugia malayi Bm9493 I 0.803
Brh_R002465 Buceros rhinoceros Brh_R002465 I 0.774
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I 0.793
GFI1 Callithrix jacchus ENSCJAG00000017609 I 0.771
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.827
Aan_R000889 Calypte anna Aan_R000889 I 0.774
Aan_R008865 Calypte anna Aan_R008865 I 0.802
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I 0.780
GFI1B Canis familiaris ENSCAFG00000019877 I 0.816
GFI1 Canis familiaris ENSCAFG00000020155 I 0.771
GFI1 Cavia porcellus ENSCPOG00000011727 I 0.771
GFI1B Cavia porcellus ENSCPOG00000026928 I 0.806
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I 0.772
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I 0.807
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I 0.817
CGI_10001094 Crassostrea gigas CGI_10001094 I 0.766
CGI_10011355 Crassostrea gigas CGI_10011355 I 0.769
CGI_10017941 Crassostrea gigas CGI_10017941 I 0.783
KGM_22443 Danaus plexippus KGM_22443 I 0.801
gfi1aa Danio rerio ENSDARG00000020746 I 0.771
gfi1ab Danio rerio ENSDARG00000044457 I 0.772
gfi1b Danio rerio ENSDARG00000079947 I 0.785
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I 0.771
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I 0.816
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I 0.788
Gfi1b Dipodomys ordii ENSDORG00000000342 I 0.809
GF10411 Drosophila ananassae FBgn0087452 I 0.789
GF15430 Drosophila ananassae FBgn0092455 I 0.782
GG10437 Drosophila erecta FBgn0102746 I 0.782
GG13774 Drosophila erecta FBgn0106037 I 0.789
GH13715 Drosophila grimshawi FBgn0121191 I 0.782
GH16734 Drosophila grimshawi FBgn0124205 I 0.789
sens Drosophila melanogaster FBgn0002573 D 0.789
sens-2 Drosophila melanogaster FBgn0051632 D 0.782
GI13460 Drosophila mojavensis FBgn0136216 I 0.789
GI23984 Drosophila mojavensis FBgn0146708 I 0.782
GL15695 Drosophila persimilis FBgn0153299 I 0.789
GL26188 Drosophila persimilis FBgn0163770 I 0.782
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.782
GA16696 Drosophila pseudoobscura FBgn0076711 I 0.789
GA28112 Drosophila pseudoobscura FBgn0249475 I 0.789
GM16223 Drosophila sechellia FBgn0171139 I 0.782
GM24598 Drosophila sechellia FBgn0179461 I 0.789
GD12667 Drosophila simulans FBgn0184394 I 0.789
GJ11823 Drosophila virilis FBgn0199077 I 0.789
GJ21268 Drosophila virilis FBgn0208401 I 0.782
GK12454 Drosophila willistoni FBgn0214464 I 0.789
GK24242 Drosophila willistoni FBgn0226203 I 0.782
GE14143 Drosophila yakuba FBgn0231766 I 0.782
GE20069 Drosophila yakuba FBgn0237393 I 0.789
GFI1 Equus caballus ENSECAG00000006647 I 0.771
GFI1B Equus caballus ENSECAG00000008127 I 0.816
GFI1 Erinaceus europaeus ENSEEUG00000000198 I 0.771
GFI1 Felis catus ENSFCAG00000005914 I 0.771
GFI1B Felis catus ENSFCAG00000027147 I 0.814
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I 0.802
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I 0.774
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I 0.787
GFI1B Gallus gallus ENSGALG00000003478 I 0.802
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I 0.774
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I 0.771
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I 0.763
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I 0.783
Gfo_R007994 Geospiza fortis Gfo_R007994 I 0.802
Gfo_R010648 Geospiza fortis Gfo_R010648 I 0.774
GFI1 Gorilla gorilla ENSGGOG00000005320 I 0.771
GFI1B Gorilla gorilla ENSGGOG00000015828 I 0.815
HCOI00212900 Haemonchus contortus HCOI00212900 I 0.781
HMEL012459 Heliconius melpomene HMEL012459 I 0.801
HelroG145534 Helobdella robusta HelroG145534 I 0.767
HelroG145685 Helobdella robusta HelroG145685 I 0.781
HelroG67579 Helobdella robusta HelroG67579 I 0.757
GFI1 Homo sapiens ENSG00000162676 D 0.771
GFI1B Homo sapiens ENSG00000165702 D 0.827
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I 0.771
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I 0.814
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I 0.802
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I 0.771
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I 0.774
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I 0.785
LotgiG129344 Lottia gigantea LotgiG129344 I 0.759
LotgiG83709 Lottia gigantea LotgiG83709 I 0.785
LotgiG98465 Lottia gigantea LotgiG98465 I 0.783
GFI1 Loxodonta africana ENSLAFG00000018346 I 0.771
GFI1B Loxodonta africana ENSLAFG00000022367 I 0.803
LCUP007432 Lucilia cuprina LCUP007432 I 0.789
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I 0.801
ENSP00000361195 Macaca fascicularis ENSP00000361195 I 0.817
ENSP00000399719 Macaca fascicularis ENSP00000399719 I 0.767
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I 0.771
MESCA000812 Megaselia scalaris MESCA000812 I 0.798
GFI1B Meleagris gallopavo ENSMGAG00000006129 I 0.802
GFI1 Meleagris gallopavo ENSMGAG00000008187 I 0.774
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I 0.791
GFI1 Monodelphis domestica ENSMODG00000011802 I 0.771
GFI1B Monodelphis domestica ENSMODG00000012600 I 0.807
MDOA006012 Musca domestica MDOA006012 I 0.779
MDOA011065 Musca domestica MDOA011065 I 0.782
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I 0.771
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I 0.816
Gfi1b Mus musculus ENSMUSG00000026815 D 0.817
Gfi1 Mus musculus ENSMUSG00000029275 D 0.771
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I 0.799
GFI1B Myotis lucifugus ENSMLUG00000006673 I 0.812
GFI1 Myotis lucifugus ENSMLUG00000015191 I 0.771
NV16026 Nasonia vitripennis NV16026 I 0.785
NEMVEDRAFT_v1g182742 Nematostella vectensis NEMVEDRAFT_v1g182742 I 0.776
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I 0.771
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I 0.815
GFI1B Ochotona princeps ENSOPRG00000000125 I 0.827
GFI1 Ochotona princeps ENSOPRG00000001473 I 0.771
Ogr09401 Ophisaurus gracilis Ogr09401 I 0.772
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I 0.756
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I 0.773
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I 0.772
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.794
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I 0.815
gfi1aa Oryzias latipes ENSORLG00000005060 I 0.756
gfi1b Oryzias latipes ENSORLG00000014390 I 0.775
GFI1B Otolemur garnettii ENSOGAG00000008879 I 0.806
GFI1 Otolemur garnettii ENSOGAG00000027913 I 0.771
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I 0.782
GFI1B Pan troglodytes ENSPTRG00000021505 I 0.815
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I 0.771
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I 0.817
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I 0.791
PHUM248190 Pediculus humanus PHUM248190 I 0.797
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I 0.774
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I 0.810
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I 0.765
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I 0.756
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I 0.774
Pvit_00259 Pogona vitticeps Pvit_00259 I 0.772
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I 0.815
GFI1 Procavia capensis ENSPCAG00000011020 I 0.782
GFI1B Procavia capensis ENSPCAG00000012329 I 0.806
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I 0.790
GFI1 Pteropus vampyrus ENSPVAG00000006928 I 0.771
Gfi1 Rattus norvegicus ENSRNOG00000002042 D 0.771
Gfi1b Rattus norvegicus ENSRNOG00000011353 I 0.815
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I 0.791
Sakowv30015302m.g Saccoglossus kowalevskii Sakowv30015302m.g I 0.766
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I 0.782
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I 0.788
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I 0.771
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I 0.791
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I 0.791
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I 0.791
GFI1B Sus scrofa ENSSSCG00000005737 I 0.814
GFI1 Sus scrofa ENSSSCG00000006902 I 0.771
GFI1 Taeniopygia guttata ENSTGUG00000006060 I 0.774
gfi1ab Takifugu rubripes ENSTRUG00000000415 I 0.772
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.804
gfi1aa Takifugu rubripes ENSTRUG00000004744 I 0.760
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.773
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I 0.776
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I 0.775
TC013474 Tribolium castaneum TC013474 I 0.792
GFI1 Tursiops truncatus ENSTTRG00000000082 I 0.771
Tal_R001363 Tyto alba Tal_R001363 I 0.802
Tal_R006464 Tyto alba Tal_R006464 I 0.774
WUBG_13248 Wuchereria bancrofti WUBG_13248 I 0.803
gfi1b.L Xenopus laevis XB-GENE-944429 I 0.786
gfi1b Xenopus tropicalis XB-GENE-944426 I 0.786
gfi1 Xenopus tropicalis XB-GENE-960553 I 0.771
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I 0.756
L798_01833 Zootermopsis nevadensis L798_01833 I 0.795