ZFP90 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000002521 T105685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP90
M07672_2.00 		Homo sapiens
CYTTAGCTGYRT
AYRCAGCTAARG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP90.RCADE.OriginalMapping 		0.798 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000002345 C2H2 ZF 200 222
ENSPCAP00000002345 C2H2 ZF 243 265
ENSPCAP00000002345 C2H2 ZF 271 293
ENSPCAP00000002345 C2H2 ZF 299 321
ENSPCAP00000002345 C2H2 ZF 327 349
ENSPCAP00000002345 C2H2 ZF 355 377
ENSPCAP00000002345 C2H2 ZF 383 405
ENSPCAP00000002345 C2H2 ZF 439 461
ENSPCAP00000002345 C2H2 ZF 486 508
ENSPCAP00000002345 C2H2 ZF 514 536
ENSPCAP00000002345 C2H2 ZF 542 564
ENSPCAP00000002345 C2H2 ZF 570 592
ENSPCAP00000002345 C2H2 ZF 598 620

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N
PK09701.1 Cannabis sativa PK09701.1 N
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N
gene13234-v1.0-hybrid Fragaria vesca gene13234-v1.0-hybrid N
GLYMA10G37780 Glycine max GLYMA10G37780 N
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N
Gorai.004G117900 Gossypium raimondii Gorai.004G117900 N
MDP0000291317 Malus domestica MDP0000291317 N
MDP0000157870 Malus domestica MDP0000157870 N
MDP0000905888 Malus domestica MDP0000905888 N
cassava18962.valid.m1 Manihot esculenta cassava18962.valid.m1 N
mgf002951m Mimulus guttatus mgf002951m N
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N
OBART09G20240 Oryza barthii OBART09G20240 N
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N
OLONG_005584 Oryza longistaminata OLONG_005584 N
OMERI01G25790 Oryza meridionalis OMERI01G25790 N
ONIVA03G00390 Oryza nivara ONIVA03G00390 N
OPUNC09G18580 Oryza punctata OPUNC09G18580 N
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N
OS09G0570200 Oryza sativa OS09G0570200 N
Pm019310 Prunus mume Pm019310 N
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N
30169.m006244 Ricinus communis 30169.m006244 N
TCM_015200 Theobroma cacao TCM_015200 N
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N
GRMZM2G142502 Zea mays GRMZM2G142502 N
AC234522.1_FG009 Zea mays AC234522.1_FG009 N