CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp2
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000030750
T109179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000041481
C2H2 ZF
102
124
YECDECGKSFSQSSSLLKHQRIH
ENSRNOP00000041481
C2H2 ZF
130
152
YKCNVCDKHFIERSSLTVHQRTH
ENSRNOP00000041481
C2H2 ZF
158
180
YKCNECGKAFSQSMNLTVHQRTH
ENSRNOP00000041481
C2H2 ZF
186
208
YQCKECGKAFRKNSSLIQHERIH
ENSRNOP00000041481
C2H2 ZF
214
236
YKCNDCGKAFTQSMNLTVHQRTH
ENSRNOP00000041481
C2H2 ZF
242
264
YECNQCGKAFSQSMHLIVHQRSH
ENSRNOP00000041481
C2H2 ZF
270
292
YECSECGKAFSKSSTLTLHQRNH
ENSRNOP00000041481
C2H2 ZF
298
320
YKCNKCGKSFSQSTYLIEHQRLH
ENSRNOP00000041481
C2H2 ZF
326
348
FECNQCGKAFSKNSSLTQHRRIH
ENSRNOP00000041481
C2H2 ZF
354
376
YQCMVCGKHFTGRSSLTVHQVIH
ENSRNOP00000041481
C2H2 ZF
382
404
YECTECGKAFSQSAYLIEHQRIH
ENSRNOP00000041481
C2H2 ZF
410
432
YECDQCGKAFIKNSSLIVHQRIH
ENSRNOP00000041481
C2H2 ZF
438
460
YKCNECGKSFSRSTNLTRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_037_00132
Aquilegia coerulea
Aquca_037_00132
I
0.000
fgenesh2_kg.2__42__AT1G64380.1
Arabidopsis lyrata
fgenesh2_kg.2__42__AT1G64380.1
I
0.000
ERF061
Arabidopsis thaliana
AT1G64380
I
0.000
Bostr.29223s0053
Boechera stricta
Bostr.29223s0053
I
0.000
BRADI2G15847
Brachypodium distachyon
BRADI2G15847
N
0.000
BRADI5G16450
Brachypodium distachyon
BRADI5G16450
I
0.000
Cagra.0062s0002
Capsella grandiflora
Cagra.0062s0002
I
0.000
Carubv10020622m.g
Capsella rubella
Carubv10020622m.g
I
0.000
evm.TU.supercontig_79.43
Carica papaya
evm.TU.supercontig_79.43
I
0.000
Cla011559
Citrullus lanatus
Cla011559
I
0.000
Cla011093
Citrullus lanatus
Cla011093
I
0.000
Ciclev10021265m.g
Citrus clementina
Ciclev10021265m.g
I
0.000
orange1.1g045091m.g
Citrus sinensis
orange1.1g045091m.g
I
0.000
Cucsa.303840
Cucumis sativus
Cucsa.303840
I
0.000
Eucgr.D01731
Eucalyptus grandis
Eucgr.D01731
I
0.000
Eucgr.E00857
Eucalyptus grandis
Eucgr.E00857
I
0.000
Thhalv10023588m.g
Eutrema salsugineum
Thhalv10023588m.g
I
0.000
gene32084-v1.0-hybrid
Fragaria vesca
gene32084-v1.0-hybrid
I
0.000
GLYMA01G43450
Glycine max
GLYMA01G43450
I
0.000
GLYMA11G02050
Glycine max
GLYMA11G02050
I
0.000
Gorai.006G207800
Gossypium raimondii
Gorai.006G207800
I
0.000
Gorai.007G026200
Gossypium raimondii
Gorai.007G026200
N
0.000
Gorai.008G253900
Gossypium raimondii
Gorai.008G253900
I
0.000
Gorai.012G130600
Gossypium raimondii
Gorai.012G130600
I
0.000
MLOC_53577
Hordeum vulgare
MLOC_53577
N
0.000
LPERR05G22130
Leersia perrieri
LPERR05G22130
N
0.000
Lus10001898.g
Linum usitatissimum
Lus10001898.g
I
0.000
Lus10003889.g
Linum usitatissimum
Lus10003889.g
I
0.000
chr2.CM0060.390.nc
Lotus japonicus
chr2.CM0060.390.nc
I
0.000
MDP0000292965
Malus domestica
MDP0000292965
I
0.000
MDP0000861708
Malus domestica
MDP0000861708
I
0.000
mgf016403m
Mimulus guttatus
mgf016403m
I
0.000
mgf021167m
Mimulus guttatus
mgf021167m
I
0.000
GSMUA_Achr1G27990_001
Musa acuminata
GSMUA_Achr1G27990_001
N
0.000
GSMUA_Achr1G00070_001
Musa acuminata
GSMUA_Achr1G00070_001
I
0.000
ORGLA05G0229700
Oryza glaberrima
ORGLA05G0229700
N
0.000
ORGLA03G0412600
Oryza glaberrima
ORGLA03G0412600
N
0.000
BGIOSGA017525
Oryza indica
BGIOSGA017525
N
0.000
ONIVA05G28560
Oryza nivara
ONIVA05G28560
N
0.000
OPUNC05G24070
Oryza punctata
OPUNC05G24070
N
0.000
ORUFI05G28440
Oryza rufipogon
ORUFI05G28440
N
0.000
OS05G0572000
Oryza sativa
OS05G0572000
N
0.000
Pavir.J10163
Panicum virgatum
Pavir.J10163
N
0.000
Pavir.J01332
Panicum virgatum
Pavir.J01332
N
0.000
Pavir.Gb00710
Panicum virgatum
Pavir.Gb00710
I
0.000
Pavir.Ga00913
Panicum virgatum
Pavir.Ga00913
I
0.000
POPTR_0001s10540
Populus trichocarpa
POPTR_0001s10540
I
0.000
Pm024053
Prunus mume
Pm024053
I
0.000
PRUPE_ppa009005mg
Prunus persica
PRUPE_ppa009005mg
I
0.000
30190.m010825
Ricinus communis
30190.m010825
I
0.000
SapurV1A.0035s0570
Salix purpurea
SapurV1A.0035s0570
I
0.000
SapurV1A.0237s0310
Salix purpurea
SapurV1A.0237s0310
I
0.000
Si012169m.g
Setaria italica
Si012169m.g
I
0.000
Sb06g023313
Sorghum bicolor
Sb06g023313
I
0.000
Sb09g029070
Sorghum bicolor
Sb09g029070
N
0.000
VIT_19s0014g03180
Vitis vinifera
VIT_19s0014g03180
I
0.000
GRMZM5G846057
Zea mays
GRMZM5G846057
I
0.000
GRMZM2G100982
Zea mays
GRMZM2G100982
I
0.000
GRMZM2G026926
Zea mays
GRMZM2G026926
I
0.000