PATZ1 (Tursiops truncatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTTRG00000010279 T113202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.827 1.000
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.827 1.000
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000009750 C2H2 ZF 292 314
ENSTTRP00000009750 C2H2 ZF 356 377
ENSTTRP00000009750 C2H2 ZF 383 405
ENSTTRP00000009750 C2H2 ZF 413 436
ENSTTRP00000009750 C2H2 ZF 442 464
ENSTTRP00000009750 C2H2 ZF 496 518

Links

Other C2H2 ZF family TFs
Other Tursiops truncatus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_81.123 Carica papaya evm.TU.supercontig_81.123 N 0.000
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.000
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.000
Gorai.001G111600 Gossypium raimondii Gorai.001G111600 N 0.000
cassava19449.valid.m1 Manihot esculenta cassava19449.valid.m1 N 0.000
POPTR_0001s24860 Populus trichocarpa POPTR_0001s24860 N 0.000
POPTR_0009s03800 Populus trichocarpa POPTR_0009s03800 N 0.000
PRUPE_ppa002797mg Prunus persica PRUPE_ppa002797mg N 0.000
28650.m000190 Ricinus communis 28650.m000190 N 0.000
SapurV1A.0040s0480 Salix purpurea SapurV1A.0040s0480 N 0.000
SapurV1A.0041s0170 Salix purpurea SapurV1A.0041s0170 N 0.000
TCM_041814 Theobroma cacao TCM_041814 N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000