LACBIDRAFT_295582 (Laccaria bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LACBIDRAFT_295582 T121203_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_114363
M01461_2.00 		Schizophyllum commune
NGATCBDCR
YGHVGATCN		 PBM
Najafabadi et al.(2015a)
pTH11153 		0.816 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR01478 C2H2 ZF 213 235
EDR01478 C2H2 ZF 248 272

Links

Other C2H2 ZF family TFs
Other Laccaria bicolor TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10026 Aegilops tauschii F775_10026 I
F775_09858 Aegilops tauschii F775_09858 I
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I
BZIP17 Arabidopsis thaliana AT2G40950 D
BZIP49 Arabidopsis thaliana AT3G56660 I
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I
Bo4g190610 Brassica oleracea Bo4g190610 I
Bo4g012880 Brassica oleracea Bo4g012880 I
Bra034147 Brassica rapa Bra034147 I
Bra023224 Brassica rapa Bra023224 I
Bra016959 Brassica rapa Bra016959 I
PK07115.1 Cannabis sativa PK07115.1 I
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I
Carubv10022722m.g Capsella rubella Carubv10022722m.g I
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I
Ca_08103 Cicer arietinum Ca_08103 I
Cla017717 Citrullus lanatus Cla017717 I
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I
Cucsa.337510 Cucumis sativus Cucsa.337510 I
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I
GLYMA03G27865 Glycine max GLYMA03G27865 I
GLYMA19G30681 Glycine max GLYMA19G30681 I
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I
MLOC_42759 Hordeum vulgare MLOC_42759 I
MLOC_58500 Hordeum vulgare MLOC_58500 I
LPERR05G13000 Leersia perrieri LPERR05G13000 I
Lus10010440.g Linum usitatissimum Lus10010440.g I
Lus10012104.g Linum usitatissimum Lus10012104.g I
Lus10027290.g Linum usitatissimum Lus10027290.g I
Lus10038995.g Linum usitatissimum Lus10038995.g I
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I
MDP0000299504 Malus domestica MDP0000299504 I
MDP0000270677 Malus domestica MDP0000270677 I
MDP0000180785 Malus domestica MDP0000180785 I
MDP0000138811 Malus domestica MDP0000138811 I
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I
MTR_7g088890 Medicago truncatula MTR_7g088890 I
mgf013640m Mimulus guttatus mgf013640m I
mgf002378m Mimulus guttatus mgf002378m I
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D
OB05G24300 Oryza brachyantha OB05G24300 I
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I
BGIOSGA018059 Oryza indica BGIOSGA018059 I
ONIVA05G17010 Oryza nivara ONIVA05G17010 I
OPUNC05G14460 Oryza punctata OPUNC05G14460 I
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I
BZIP39 Oryza sativa OS05G0411300 I
Pavir.J18543 Panicum virgatum Pavir.J18543 I
Pavir.J00385 Panicum virgatum Pavir.J00385 I
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I
Pm016493 Prunus mume Pm016493 I
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I
29940.m000398 Ricinus communis 29940.m000398 I
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I
Si021442m.g Setaria italica Si021442m.g I
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I
Sb09g020320 Sorghum bicolor Sb09g020320 I
TCM_023889 Theobroma cacao TCM_023889 I
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I
TRIUR3_02784 Triticum urartu TRIUR3_02784 I
TRIUR3_00571 Triticum urartu TRIUR3_00571 I
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I
GRMZM2G045236 Zea mays GRMZM2G045236 I