MTR_1g067640 (Medicago truncatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MTR_1g067640 T123771_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.787 0.826
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.787 0.826
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.776 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.772 0.783
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.772 0.783
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.783
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.762 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42342 C2H2 ZF 38 60
KEH42342 C2H2 ZF 84 106

Links

Other C2H2 ZF family TFs
Other Medicago truncatula TFs

374 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I
TP53 Bos taurus ENSBTAG00000001069 I
TP53 Callithrix jacchus ENSCJAG00000014978 I
TP53 Canis familiaris ENSCAFG00000016714 I
TP53 Cavia porcellus ENSCPOG00000014252 I
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I
tp53 Danio rerio ENSDARG00000035559 I
TP53 Dasypus novemcinctus ENSDNOG00000005252 I
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I
TP53 Equus caballus ENSECAG00000008126 I
TP53 Erinaceus europaeus ENSEEUG00000014573 I
TP53 Felis catus ENSFCAG00000009623 I
TP53 Gorilla gorilla ENSGGOG00000009786 I
TP53 Homo sapiens ENSG00000141510 D
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I
ENSLAFG00000028299 Loxodonta africana ENSLAFG00000028299 I
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I
ENSLAFG00000027348 Loxodonta africana ENSLAFG00000027348 N
ENSLAFG00000027365 Loxodonta africana ENSLAFG00000027365 I
ENSLAFG00000032042 Loxodonta africana ENSLAFG00000032042 I
ENSLAFG00000030880 Loxodonta africana ENSLAFG00000030880 I
ENSLAFG00000030555 Loxodonta africana ENSLAFG00000030555 I
ENSLAFG00000028692 Loxodonta africana ENSLAFG00000028692 I
ENSLAFG00000027474 Loxodonta africana ENSLAFG00000027474 I
ENSP00000269305 Macaca fascicularis ENSP00000269305 I
TP53 Macaca mulatta ENSMMUG00000008639 I
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I
TP53 Microcebus murinus ENSMICG00000014853 I
ENSMODG00000007271 Monodelphis domestica ENSMODG00000007271 I
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I
Trp53 Mus musculus ENSMUSG00000059552 D
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I
TP53 Ochotona princeps ENSOPRG00000006441 I
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I
TP53 Otolemur garnettii ENSOGAG00000016871 I
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I
TP53 Pan troglodytes ENSPTRG00000008703 I
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I
TP53 Procavia capensis ENSPCAG00000012725 I
Tp53 Rattus norvegicus ENSRNOG00000010756 I
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I
TP53 Sorex araneus ENSSARG00000006206 I
TP53 Sus scrofa ENSSSCG00000017950 I
TP53 Tursiops truncatus ENSTTRG00000010250 I