ORGLA09G0084000 (Oryza glaberrima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORGLA09G0084000 T125113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.766 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA09G0084000.1 C2H2 ZF 78 100

Links

Other C2H2 ZF family TFs
Other Oryza glaberrima TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_42450 Aegilops tauschii F775_42450 I 0.767
F775_05447 Aegilops tauschii F775_05447 N 0.761
F775_01070 Aegilops tauschii F775_01070 I 0.769
AMTR_s00022p00165560 Amborella trichopoda AMTR_s00022p00165560 I 0.764
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.764
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.802
ZFP5 Arabidopsis thaliana AT1G10480 D 0.766
GIS2 Arabidopsis thaliana AT5G06650 I 0.764
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.802
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.764
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.766
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.764
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I 0.779
BRADI4G37760 Brachypodium distachyon BRADI4G37760 I 0.767
Bo9g166240 Brassica oleracea Bo9g166240 I 0.764
Bo2g155500 Brassica oleracea Bo2g155500 N 0.802
Bo2g007320 Brassica oleracea Bo2g007320 I 0.764
Bo8g109510 Brassica oleracea Bo8g109510 I 0.766
Bo9g011450 Brassica oleracea Bo9g011450 I 0.767
Bra028724 Brassica rapa Bra028724 I 0.764
Bra008787 Brassica rapa Bra008787 I 0.764
PK10012.1 Cannabis sativa PK10012.1 I 0.764
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I 0.766
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I 0.764
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.764
Carubv10003685m.g Capsella rubella Carubv10003685m.g I 0.766
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.764
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.764
evm.TU.supercontig_116.88 Carica papaya evm.TU.supercontig_116.88 I 0.764
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.764
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.766
Ca_23376 Cicer arietinum Ca_23376 N 0.757
Ca_08116 Cicer arietinum Ca_08116 I 0.766
Ciclev10003844m.g Citrus clementina Ciclev10003844m.g I 0.764
orange1.1g046965m.g Citrus sinensis orange1.1g046965m.g I 0.764
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.766
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.764
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.764
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.815
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.764
GLYMA06G14783 Glycine max GLYMA06G14783 I 0.764
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.764
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.827
MLOC_38864 Hordeum vulgare MLOC_38864 N 0.761
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.827
LPERR08G07840 Leersia perrieri LPERR08G07840 I 0.764
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.764
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.764
MDP0000165710 Malus domestica MDP0000165710 I 0.767
MDP0000121370 Malus domestica MDP0000121370 I 0.767
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.764
cassava44297.m1 Manihot esculenta cassava44297.m1 I 0.766
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.757
OBART09G11250 Oryza barthii OBART09G11250 I 0.827
OB09G17800 Oryza brachyantha OB09G17800 I 0.827
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.827
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.827
OLONG_006424 Oryza longistaminata OLONG_006424 I 0.827
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.827
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.827
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.827
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.827
OS09G0431900 Oryza sativa OS09G0431900 I 0.827
Pavir.Bb02239 Panicum virgatum Pavir.Bb02239 I 0.779
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.766
Pavir.J36164 Panicum virgatum Pavir.J36164 I 0.779
Pavir.Ia03096 Panicum virgatum Pavir.Ia03096 I 0.777
Pavir.Ia03263 Panicum virgatum Pavir.Ia03263 I 0.774
Pavir.Ib01877 Panicum virgatum Pavir.Ib01877 I 0.764
Pavir.Ib01803 Panicum virgatum Pavir.Ib01803 I 0.777
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I 0.774
Pm008291 Prunus mume Pm008291 I 0.764
30045.m000471 Ricinus communis 30045.m000471 I 0.766
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.767
SELMODRAFT_405785 Selaginella moellendorffii SELMODRAFT_405785 I 0.777
SELMODRAFT_450813 Selaginella moellendorffii SELMODRAFT_450813 I 0.777
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.767
Si031489m.g Setaria italica Si031489m.g I 0.779
Si037914m.g Setaria italica Si037914m.g I 0.777
Si028367m.g Setaria italica Si028367m.g I 0.766
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.764
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.764
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.764
Sb02g025390 Sorghum bicolor Sb02g025390 I 0.779
Sb01g034110 Sorghum bicolor Sb01g034110 I 0.774
TCM_044725 Theobroma cacao TCM_044725 I 0.764
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.827
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.827
Traes_5DL_DD8A0F6BE Triticum aestivum Traes_5DL_DD8A0F6BE I 0.767
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.827
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.827
TRIUR3_34498 Triticum urartu TRIUR3_34498 I 0.764
TRIUR3_30765 Triticum urartu TRIUR3_30765 N 0.761
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I 0.766
GRMZM2G161255 Zea mays GRMZM2G161255 I 0.777
GRMZM2G403590 Zea mays GRMZM2G403590 I 0.774
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.764
GRMZM2G115388 Zea mays GRMZM2G115388 I 0.774
GRMZM2G108818 Zea mays GRMZM2G108818 I 0.779
GRMZM2G037574 Zea mays GRMZM2G037574 I 0.779