CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI04G17060
(
Oryza rufipogon
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ORUFI04G17060
T125158_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI04G17060.1
C2H2 ZF
362
384
YECSECHKTFSTHQALGGHVAAH
ORUFI04G17060.1
C2H2 ZF
424
446
HQCLRCPMVFPTGQALGGHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Oryza rufipogon
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_700593.1
Arabidopsis lyrata
scaffold_700593.1
I
0.757
ZAT3
Arabidopsis thaliana
AT4G35280
I
0.757
Bostr.7867s1389
Boechera stricta
Bostr.7867s1389
I
0.757
Bo7g117320
Brassica oleracea
Bo7g117320
I
0.757
Bra017706
Brassica rapa
Bra017706
I
0.757
Cagra.2350s0072
Capsella grandiflora
Cagra.2350s0072
I
0.757
Thhalv10025912m.g
Eutrema salsugineum
Thhalv10025912m.g
I
0.757
GSMUA_Achr6G34890_001
Musa acuminata
GSMUA_Achr6G34890_001
I
0.762
gw1.254.15.1
Physcomitrella patens
gw1.254.15.1
I
0.756