PV04_05279 (Capronia semiimmersa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PV04_05279 T127344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05242
M01884_2.00 		Neurospora crassa
NHCCCRCN
NGYGGGDN		 PBM
Weirauch et al.(2014)
pTH8950 		0.761 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW69400 C2H2 ZF 56 80
KIW69400 C2H2 ZF 86 110

Links

Other C2H2 ZF family TFs
Other Capronia semiimmersa TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I
AT2G42040 Arabidopsis thaliana AT2G42040 D
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I
Bo3g035920 Brassica oleracea Bo3g035920 I
Bo4g014690 Brassica oleracea Bo4g014690 I
Bo4g191280 Brassica oleracea Bo4g191280 I
Bra000251 Brassica rapa Bra000251 I
Bra004667 Brassica rapa Bra004667 I
Bra016897 Brassica rapa Bra016897 I
PK26699.1 Cannabis sativa PK26699.1 I
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I
Carubv10023878m.g Capsella rubella Carubv10023878m.g I
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I
Ca_07320 Cicer arietinum Ca_07320 I
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I
Cucsa.242590 Cucumis sativus Cucsa.242590 I
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I
GLYMA09G16841 Glycine max GLYMA09G16841 I
GLYMA02G28962 Glycine max GLYMA02G28962 I
GLYMA03G30170 Glycine max GLYMA03G30170 I
GLYMA19G33070 Glycine max GLYMA19G33070 I
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I
MLOC_17575 Hordeum vulgare MLOC_17575 I
LPERR02G28190 Leersia perrieri LPERR02G28190 I
LPERR06G06210 Leersia perrieri LPERR06G06210 I
Lus10021062.g Linum usitatissimum Lus10021062.g I
Lus10004164.g Linum usitatissimum Lus10004164.g I
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I
MDP0000121493 Malus domestica MDP0000121493 I
MDP0000154434 Malus domestica MDP0000154434 I
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I
MTR_7g093360 Medicago truncatula MTR_7g093360 I
MTR_7g093350 Medicago truncatula MTR_7g093350 I
MTR_1g054175 Medicago truncatula MTR_1g054175 I
mgf007626m Mimulus guttatus mgf007626m I
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I
OBART06G06800 Oryza barthii OBART06G06800 I
OB06G16230 Oryza brachyantha OB06G16230 I
OB02G41140 Oryza brachyantha OB02G41140 I
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I
BGIOSGA005516 Oryza indica BGIOSGA005516 I
BGIOSGA022518 Oryza indica BGIOSGA022518 I
OMERI06G07980 Oryza meridionalis OMERI06G07980 I
OMERI02G32570 Oryza meridionalis OMERI02G32570 I
ONIVA06G08110 Oryza nivara ONIVA06G08110 I
ONIVA02G36360 Oryza nivara ONIVA02G36360 I
OPUNC06G06450 Oryza punctata OPUNC06G06450 I
OPUNC02G31650 Oryza punctata OPUNC02G31650 I
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I
OS06G0207600 Oryza sativa OS06G0207600 I
OS02G0773600 Oryza sativa OS02G0773600 I
Pavir.Aa00328 Panicum virgatum Pavir.Aa00328 N
Pavir.J07916 Panicum virgatum Pavir.J07916 N
Pavir.J23833 Panicum virgatum Pavir.J23833 I
Pavir.J25248 Panicum virgatum Pavir.J25248 I
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I
Pm025936 Prunus mume Pm025936 I
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I
29613.m000377 Ricinus communis 29613.m000377 I
29613.m000379 Ricinus communis 29613.m000379 I
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I
Si019733m.g Setaria italica Si019733m.g N
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I
Sb10g006810 Sorghum bicolor Sb10g006810 I
Sb04g034665 Sorghum bicolor Sb04g034665 N
TCM_024932 Theobroma cacao TCM_024932 I
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I
GRMZM2G165991 Zea mays GRMZM2G165991 I
GRMZM2G134552 Zea mays GRMZM2G134552 N
GRMZM2G033915 Zea mays GRMZM2G033915 I