CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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S40288_05686
(
Stachybotrys chartarum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
S40288_05686
T128143_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.827
1.000
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.822
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFA78115
C2H2 ZF
319
340
QRCTYPDCGKTFKDLKAHMLTH
KFA78115
C2H2 ZF
347
373
KCPIQTCEYHVKGFARKYDKNRHTLTH
KFA78115
C2H2 ZF
378
408
MVCGFCPGSGSAAEKSFNRADVFKRHLTAVH
KFA78115
C2H2 ZF
442
461
KCSTCSQTFSNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Stachybotrys chartarum
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.6__2821__AT4G06634.1
Arabidopsis lyrata
fgenesh2_kg.6__2821__AT4G06634.1
I
YY1
Arabidopsis thaliana
AT4G06634
D
Bostr.3877s0062
Boechera stricta
Bostr.3877s0062
I
Bo3g023850
Brassica oleracea
Bo3g023850
I
Bra029186
Brassica rapa
Bra029186
I
Bra035726
Brassica rapa
Bra035726
I
Cagra.2657s0002
Capsella grandiflora
Cagra.2657s0002
I
Carubv10001157m.g
Capsella rubella
Carubv10001157m.g
I
Ca_00041
Cicer arietinum
Ca_00041
N
Thhalv10028723m.g
Eutrema salsugineum
Thhalv10028723m.g
I