C55C2.1_CONSTRUCT (PBM CONSTRUCTS)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 C55C2.1_CONSTRUCT T137733_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00		 PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00649_2.00 C2H2 ZF 51 73
M00649_2.00 C2H2 ZF 104 126
M00649_2.00 C2H2 ZF 132 153

DNA Binding Domains

Protein ID Domain From To Sequence
C55C2.1_CONSTRUCT C2H2 ZF 51 73
C55C2.1_CONSTRUCT C2H2 ZF 104 126
C55C2.1_CONSTRUCT C2H2 ZF 132 153

Links

Other C2H2 ZF family TFs
Other PBM CONSTRUCTS TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG04163 Caenorhabditis briggsae CBG04163 I 0.808
scrt-1 Caenorhabditis elegans WBGene00016948 I 0.827
CJA18229 Caenorhabditis japonica CJA18229 I 0.757
CRE30071 Caenorhabditis remanei CRE30071 I 0.824
EEL_0000427701 Elaeophora elaphi EEL_0000427701 I 0.761
nLs.2.1.2.g04589 Litomosoides sigmodontis nLs.2.1.2.g04589 I 0.765
OESDEN_06135 Oesophagostomum dentatum OESDEN_06135 I 0.757
nOo.2.0.1.g09798 Onchocerca ochengi nOo.2.0.1.g09798 I 0.765
WBGene00245863 Onchocerca volvulus WBGene00245863 I 0.765
SMUV_0000156601 Syphacia muris SMUV_0000156601 I 0.761
TCLT_0000703901 Thelazia callipaeda TCLT_0000703901 I 0.761
WUBG_05161 Wuchereria bancrofti WUBG_05161 I 0.765