estExt_fgenesh2_pg.C_440053 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_440053 T138711_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_440053 C2H2 ZF 485 507
estExt_fgenesh2_pg.C_440053 C2H2 ZF 513 535
estExt_fgenesh2_pg.C_440053 C2H2 ZF 541 563
estExt_fgenesh2_pg.C_440053 C2H2 ZF 569 591

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.000
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.000
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.000
AGL105 Arabidopsis thaliana AT5G37415 I 0.000
AGL77 Arabidopsis thaliana AT5G38740 I 0.000
AGL81 Arabidopsis thaliana AT5G39750 I 0.000
AGL98 Arabidopsis thaliana AT5G39810 I 0.000
AGL76 Arabidopsis thaliana AT5G40120 I 0.000
AGL43 Arabidopsis thaliana AT5G40220 I 0.000
AGL75 Arabidopsis thaliana AT5G41200 I 0.000
Bo4g139560 Brassica oleracea Bo4g139560 N 0.000
Bo4g139620 Brassica oleracea Bo4g139620 N 0.000
Bo4g139260 Brassica oleracea Bo4g139260 I 0.000
Bra025607 Brassica rapa Bra025607 N 0.000
Bra025609 Brassica rapa Bra025609 I 0.000
Bra025619 Brassica rapa Bra025619 N 0.000
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.000
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.000