gw1.15.181.1 (Phycomyces blakesleeanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.15.181.1 T140039_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.816 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.15.181.1 C2H2 ZF 8 30
gw1.15.181.1 C2H2 ZF 36 60

Links

Other C2H2 ZF family TFs
Other Phycomyces blakesleeanus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_12743 Aegilops tauschii F775_12743 N
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N
Bo7g117320 Brassica oleracea Bo7g117320 I
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I
Ca_05641 Cicer arietinum Ca_05641 I
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I
GLYMA10G40400 Glycine max GLYMA10G40400 I
MLOC_51405 Hordeum vulgare MLOC_51405 I
LPERR03G19190 Leersia perrieri LPERR03G19190 N
LPERR03G21480 Leersia perrieri LPERR03G21480 I
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N
OBART03G22560 Oryza barthii OBART03G22560 N
OBART03G22570 Oryza barthii OBART03G22570 I
OB03G31780 Oryza brachyantha OB03G31780 I
OB03G31790 Oryza brachyantha OB03G31790 N
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I
BGIOSGA010468 Oryza indica BGIOSGA010468 I
BGIOSGA010470 Oryza indica BGIOSGA010470 N
BGIOSGA010469 Oryza indica BGIOSGA010469 N
OLONG_027628 Oryza longistaminata OLONG_027628 I
OPUNC03G21190 Oryza punctata OPUNC03G21190 N
OPUNC12G15600 Oryza punctata OPUNC12G15600 I
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N
OS03G0437100 Oryza sativa OS03G0437100 N
OS03G0437200 Oryza sativa OS03G0437200 I
OS11G0340477 Oryza sativa OS11G0340477 N
OS12G0583700 Oryza sativa OS12G0583700 I
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I
Si037343m.g Setaria italica Si037343m.g N
Si037516m.g Setaria italica Si037516m.g N
Sb01g031920 Sorghum bicolor Sb01g031920 N
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I
GRMZM5G883760 Zea mays GRMZM5G883760 N