Ocbimv22037065m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22037065m.g T142035_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22037065m.p C2H2 ZF 96 118

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N
BRADI3G16050 Brachypodium distachyon BRADI3G16050 N
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N
PK27100.1 Cannabis sativa PK27100.1 N
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N
GLYMA13G22855 Glycine max GLYMA13G22855 N
GLYMA13G22881 Glycine max GLYMA13G22881 N
GLYMA17G11981 Glycine max GLYMA17G11981 N
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N
MLOC_75540 Hordeum vulgare MLOC_75540 N
MLOC_66012 Hordeum vulgare MLOC_66012 N
MLOC_42818 Hordeum vulgare MLOC_42818 N
MDP0000394762 Malus domestica MDP0000394762 N
mgf025287m Mimulus guttatus mgf025287m N
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N
OB03G40190 Oryza brachyantha OB03G40190 N
OB08G27840 Oryza brachyantha OB08G27840 N
OB08G27850 Oryza brachyantha OB08G27850 N
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N
BGIOSGA018468 Oryza indica BGIOSGA018468 N
BGIOSGA009862 Oryza indica BGIOSGA009862 N
BGIOSGA020445 Oryza indica BGIOSGA020445 N
OS03G0733400 Oryza sativa OS03G0733400 N
OS05G0583200 Oryza sativa OS05G0583200 N
Pavir.J31170 Panicum virgatum Pavir.J31170 N
Pavir.J05554 Panicum virgatum Pavir.J05554 N
Pavir.Ib03527 Panicum virgatum Pavir.Ib03527 N
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N
Si034159m.g Setaria italica Si034159m.g N
Si000431m.g Setaria italica Si000431m.g N
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N
Sb01g009090 Sorghum bicolor Sb01g009090 N
Sb02g043380 Sorghum bicolor Sb02g043380 N
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N
Traes_6AS_2B943BE9C Triticum aestivum Traes_6AS_2B943BE9C N
Traes_6DS_FC6D9CA6B Triticum aestivum Traes_6DS_FC6D9CA6B N
TRIUR3_10927 Triticum urartu TRIUR3_10927 N