Sakowv30026316m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30026316m.g T142361_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.820 0.930
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.820 0.930
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.803 0.904
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.803 0.904
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.803 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23915759_peptide C2H2 ZF 461 482
23915759_peptide C2H2 ZF 488 510
23915759_peptide C2H2 ZF 805 827
23915759_peptide C2H2 ZF 833 855
23915759_peptide C2H2 ZF 863 886
23915760_peptide C2H2 ZF 460 481
23915760_peptide C2H2 ZF 487 509
23915760_peptide C2H2 ZF 804 826
23915760_peptide C2H2 ZF 832 854
23915760_peptide C2H2 ZF 862 885
23915761_peptide C2H2 ZF 415 436
23915761_peptide C2H2 ZF 442 464
23915761_peptide C2H2 ZF 759 781
23915761_peptide C2H2 ZF 787 809
23915761_peptide C2H2 ZF 817 840

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007319 Acyrthosiphon pisum ACYPI007319 I 0.760
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.803
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.803
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.820
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.803
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.820
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.803
AARA004246 Anopheles arabiensis AARA004246 N 0.756
AMEC015245 Anopheles melas AMEC015245 I 0.759
ASIS012904 Anopheles sinensis ASIS012904 N 0.757
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.820
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.803
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.801
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.820
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.816
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.764
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.803
BCL11B Bos taurus ENSBTAG00000018019 I 0.820
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.820
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.803
Aan_R000616 Calypte anna Aan_R000616 I 0.820
Aan_R006276 Calypte anna Aan_R006276 I 0.803
BCL11B Canis familiaris ENSCAFG00000017809 I 0.820
CapteG65449 Capitella teleta CapteG65449 I 0.760
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.803
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.820
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.803
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.820
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.820
bcl11aa Danio rerio ENSDARG00000061352 I 0.813
bcl11ab Danio rerio ENSDARG00000063153 I 0.813
im:7142702 Danio rerio ENSDARG00000067727 I 0.816
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.820
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.803
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.803
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.803
BCL11A Felis catus ENSFCAG00000027154 I 0.803
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.803
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.812
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.809
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.803
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.820
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.820
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.816
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.812
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.797
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.811
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.820
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.803
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.820
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.803
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.774
BCL11A Homo sapiens ENSG00000119866 D 0.803
BCL11B Homo sapiens ENSG00000127152 D 0.820
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.803
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.820
ISCW016418 Ixodes scapularis ISCW016418 I 0.788
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.803
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.815
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.811
LotgiG139415 Lottia gigantea LotgiG139415 I 0.775
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.803
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.820
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.803
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.816
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.820
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.803
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.803
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.803
BCL11A Microcebus murinus ENSMICG00000015052 I 0.803
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.820
Bcl11a Mus musculus ENSMUSG00000000861 I 0.803
Bcl11b Mus musculus ENSMUSG00000048251 I 0.820
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.820
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.802
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.819
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.801
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.815
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.813
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.803
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.820
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.803
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.809
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.801
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.818
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.815
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.813
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.820
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.820
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.820
PHUM606430 Pediculus humanus PHUM606430 I 0.780
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.820
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.803
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.816
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.812
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.813
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.801
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.820
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.803
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.820
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.803
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.820
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.820
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.803
RPRC001562 Rhodnius prolixus RPRC001562 I 0.776
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.820
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.803
SMAR003355 Strigamia maritima SMAR003355 I 0.800
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.803
BCL11B Sus scrofa ENSSSCG00000002507 I 0.820
BCL11A Sus scrofa ENSSSCG00000008392 I 0.803
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.803
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.820
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.815
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.801
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.813
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.819
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.803
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.815
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.806
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.813
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.803
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.815
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.803
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.803
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.799
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.816
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.812
L798_02171 Zootermopsis nevadensis L798_02171 I 0.771