Gorai.004G065400 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.004G065400 T143006_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G065400.1 C2H2 ZF 263 284
Gorai.004G065400.1 C2H2 ZF 283 309

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05862 Aegilops tauschii F775_05862 N
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N
TRFL3 Arabidopsis lyrata fgenesh2_kg.1__1907__AT1G17460.1 N
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N
TRFL6 Arabidopsis thaliana AT1G72650 N
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N
Bo6g091360 Brassica oleracea Bo6g091360 N
Bra003870 Brassica rapa Bra003870 N
Bra003871 Brassica rapa Bra003871 N
Bra016044 Brassica rapa Bra016044 N
PK02666.1 Cannabis sativa PK02666.1 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Carubv10019876m.g Capsella rubella Carubv10019876m.g N
Carubv10012426m.g Capsella rubella Carubv10012426m.g N
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N
Cla015802 Citrullus lanatus Cla015802 N
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N
Cucsa.360310 Cucumis sativus Cucsa.360310 N
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N
gene07405-v1.0-hybrid Fragaria vesca gene07405-v1.0-hybrid N
GLYMA07G04160 Glycine max GLYMA07G04160 N
GLYMA16G00870 Glycine max GLYMA16G00870 N
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N
MLOC_56874 Hordeum vulgare MLOC_56874 N
LPERR02G28410 Leersia perrieri LPERR02G28410 N
Lus10037678.g Linum usitatissimum Lus10037678.g N
Lus10015664.g Linum usitatissimum Lus10015664.g N
MDP0000261067 Malus domestica MDP0000261067 N
MDP0000279204 Malus domestica MDP0000279204 N
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N
mgf013194m Mimulus guttatus mgf013194m N
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N
OBART02G34530 Oryza barthii OBART02G34530 N
OB02G41350 Oryza brachyantha OB02G41350 N
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N
BGIOSGA009134 Oryza indica BGIOSGA009134 N
ONIVA02G36570 Oryza nivara ONIVA02G36570 N
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N
OS02G0776700 Oryza sativa OS02G0776700 N
Pavir.J06110 Panicum virgatum Pavir.J06110 N
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N
POPTR_0001s17020 Populus trichocarpa POPTR_0001s17020 N
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N
Pm013286 Prunus mume Pm013286 N
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N
29706.m001295 Ricinus communis 29706.m001295 N
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N
Si016649m.g Setaria italica Si016649m.g N
Solyc03g121990.2 Solanum lycopersicum Solyc03g121990.2 N
Sb04g034770 Sorghum bicolor Sb04g034770 N
TCM_029115 Theobroma cacao TCM_029115 N
Traes_3AL_B71F3F028 Triticum aestivum Traes_3AL_B71F3F028 N
TRAES3BF079700090CFD_g Triticum aestivum TRAES3BF079700090CFD_g N
Traes_3DL_A631E1F0C Triticum aestivum Traes_3DL_A631E1F0C N
TRIUR3_15439 Triticum urartu TRIUR3_15439 N
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N
GRMZM2G049194 Zea mays GRMZM2G049194 N