LDEC009536 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC009536 T144650_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.797 0.913
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.797 0.913
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.797 0.913
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.797 0.913
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.797 0.913
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.797 0.913
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.797 0.913
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.797 0.913
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.794 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC009536-PA C2H2 ZF 548 570
LDEC009536-PA C2H2 ZF 576 598
LDEC009536-PA C2H2 ZF 604 627

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02110 Capronia coronata A1O1_02110 N
A1O3_00474 Capronia epimyces A1O3_00474 N
PV04_04208 Capronia semiimmersa PV04_04208 N
Z519_06474 Cladophialophora bantiana Z519_06474 N
G647_03661 Cladophialophora carrionii G647_03661 N
PV07_05060 Cladophialophora immunda PV07_05060 N
A1O5_07027 Cladophialophora psammophila A1O5_07027 N
A1O9_08988 Exophiala aquamarina A1O9_08988 N
HMPREF1120_03205 Exophiala dermatitidis HMPREF1120_03205 N
PV10_04395 Exophiala mesophila PV10_04395 N
PV06_01725 Exophiala oligosperma PV06_01725 N
PV11_01969 Exophiala sideris PV11_01969 N
PV08_02386 Exophiala spinifera PV08_02386 N
PV05_02394 Exophiala xenobiotica PV05_02394 N
Z517_06203 Fonsecaea pedrosoi Z517_06203 N
Z518_00107 Rhinocladiella mackenziei Z518_00107 N