klf10 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-854761 T145596_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF10
M08246_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF10 		0.804 0.928
KLF10
M04489_2.00 		Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX 		0.804 0.928
KLF10
M08317_2.00 		Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS		 ChIP-seq
Schmitges et al.(2016)
Q13118.MEME 		0.804 0.928
KLF10
M10228_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TIEG1_Q6 		0.804 0.928
KLF10
M04490_2.00 		Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX 		0.804 0.928
KLF11
M00242_2.00 		Homo sapiens
MCGCCCCC
GGGGGCGK		 PBM
Barrera et al.(2016)
KLF11_REF 		0.787 0.870
KLF11
M04554_2.00 		Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX 		0.787 0.870
KLF11
M10261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKLF_Q5 		0.787 0.870
KLF11
M00241_2.00 		Homo sapiens
MCGCCCMC
GKGGGCGK		 PBM
Barrera et al.(2016)
KLF11_R402Q 		0.787 0.870
KLF11
M04555_2.00 		Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX 		0.787 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002931580 C2H2 ZF 354 378
XP_002931580 C2H2 ZF 384 408
XP_002931580 C2H2 ZF 414 436

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I
NAC68 Arabidopsis thaliana AT4G01540 D
NAC69 Arabidopsis thaliana AT4G01550 D
anac067 Arabidopsis thaliana AT4G01520 I
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
Bo9g004110 Brassica oleracea Bo9g004110 I
Bo9g004100 Brassica oleracea Bo9g004100 I
Bo9g004090 Brassica oleracea Bo9g004090 I
Bo9g004070 Brassica oleracea Bo9g004070 I
Bo6g119080 Brassica oleracea Bo6g119080 I
Bo00853s060 Brassica oleracea Bo00853s060 I
Bra027596 Brassica rapa Bra027596 I
Bra036326 Brassica rapa Bra036326 I
Bra036328 Brassica rapa Bra036328 I
Bra008553 Brassica rapa Bra008553 I
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I
Carubv10003260m.g Capsella rubella Carubv10003260m.g I
Carubv10000489m.g Capsella rubella Carubv10000489m.g I
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I
MDP0000575835 Malus domestica MDP0000575835 I
MDP0000311190 Malus domestica MDP0000311190 I
MDP0000214515 Malus domestica MDP0000214515 I
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I