TELCIR_07985 (Teladorsagia circumcincta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TELCIR_07985 T157819_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.808 0.913
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.793 0.826
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.793 0.826
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.793 0.826
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.793 0.826
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.793 0.826
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.793 0.826
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.793 0.826
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.793 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_07985 C2H2 ZF 139 161
TELCIR_07985 C2H2 ZF 167 189
TELCIR_07985 C2H2 ZF 195 218

Links

Other C2H2 ZF family TFs
Other Teladorsagia circumcincta TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CERSUDRAFT_47040 Ceriporiopsis subvermispora CERSUDRAFT_47040 N
FOMPIDRAFT_1048193 Fomitopsis pinicola FOMPIDRAFT_1048193 I
GALMADRAFT_133211 Galerina marginata GALMADRAFT_133211 I
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I
M413DRAFT_24002 Hebeloma cylindrosporum M413DRAFT_24002 I
gw1.4.1013.1 Heterobasidion annosum gw1.4.1013.1 N
JAAARDRAFT_117714 Jaapia argillacea JAAARDRAFT_117714 I
K443DRAFT_250430 Laccaria amethystina K443DRAFT_250430 I
LACBIDRAFT_311738 Laccaria bicolor LACBIDRAFT_311738 I
Moror_17490 Moniliophthora roreri Moror_17490 I
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I
PLEOSDRAFT_12123 Pleurotus ostreatus PLEOSDRAFT_12123 I
POSPLDRAFT_42762 Postia placenta POSPLDRAFT_42762 I
GLOINDRAFT_51736 Rhizophagus irregularis GLOINDRAFT_51736 N
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I
CY34DRAFT_797588 Suillus luteus CY34DRAFT_797588 I
BN946_scf184908.g134 Trametes cinnabarina BN946_scf184908.g134 I