Bostr.5022s0003 (Boechera stricta)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Bostr.5022s0003 T163495_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		1.000 1.000
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.798 0.798
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5022s0003.1.p CG-1 21 135

Links

Other CG-1 family TFs
Other Boechera stricta TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I
EBF3 Anolis carolinensis ENSACAG00000008590 I
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I
AALB010330 Anopheles albimanus AALB010330 I
AARA002865 Anopheles arabiensis AARA002865 I
AATE014419 Anopheles atroparvus AATE014419 I
ACHR004409 Anopheles christyi ACHR004409 I
ACOM041529 Anopheles coluzzii ACOM041529 I
ACUA010350 Anopheles culicifacies ACUA010350 I
ADAC003479 Anopheles darlingi ADAC003479 I
AEPI003553 Anopheles epiroticus AEPI003553 I
AFAF000230 Anopheles farauti AFAF000230 I
AFUN004906 Anopheles funestus AFUN004906 I
AMEC016105 Anopheles melas AMEC016105 I
AMEM017983 Anopheles merus AMEM017983 I
AQUA007473 Anopheles quadriannulatus AQUA007473 I
ASIS004664 Anopheles sinensis ASIS004664 I
ASTEI06456 Anopheles stephensi ASTEI06456 I
GB42304 Apis mellifera GB42304 I
Afo_R002906 Aptenodytes forsteri Afo_R002906 I
Afo_R003215 Aptenodytes forsteri Afo_R003215 I
Afo_R012023 Aptenodytes forsteri Afo_R012023 I
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I
BGLB009291 Biomphalaria glabrata BGLB009291 I
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I
EBF3 Bos taurus ENSBTAG00000008272 I
EBF4 Bos taurus ENSBTAG00000037757 I
EBF2 Bos taurus ENSBTAG00000040390 I
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I
BTMF_0000130101 Brugia timori BTMF_0000130101 I
Brh_R001594 Buceros rhinoceros Brh_R001594 I
Brh_R003197 Buceros rhinoceros Brh_R003197 I
BXY_1639700 Bursaphelenchus xylophilus BXY_1639700 I
CBG07590 Caenorhabditis briggsae CBG07590 I
CRE15310 Caenorhabditis remanei CRE15310 I
EBF2 Callithrix jacchus ENSCJAG00000019921 I
EBF4 Callithrix jacchus ENSCJAG00000021027 I
Aan_R013029 Calypte anna Aan_R013029 I
EBF4 Canis familiaris ENSCAFG00000006631 I
EBF2 Canis familiaris ENSCAFG00000008918 I
EBF3 Canis familiaris ENSCAFG00000013267 I
EBF1 Canis familiaris ENSCAFG00000017318 I
CapteG93575 Capitella teleta CapteG93575 I
EBF2 Cavia porcellus ENSCPOG00000001463 I
EBF3 Cavia porcellus ENSCPOG00000005096 I
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I
csin100403 Clonorchis sinensis csin100403 N
CGI_10023990 Crassostrea gigas CGI_10023990 I
CpipJ_CPIJ010142 Culex pipiens CpipJ_CPIJ010142 I
CPIJ010142 Culex quinquefasciatus CPIJ010142 I
KGM_09934 Danaus plexippus KGM_09934 I
ebf2 Danio rerio ENSDARG00000042525 I
ebf1b Danio rerio ENSDARG00000069196 I
ebf1a Danio rerio ENSDARG00000099849 I
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I
YQE_08127 Dendroctonus ponderosae YQE_08127 I
DICVIV_13258 Dictyocaulus viviparus DICVIV_13258 I
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I
DME_0000265301 Dracunculus medinensis DME_0000265301 I
GF11778 Drosophila ananassae FBgn0088818 I
GG22397 Drosophila erecta FBgn0114569 I
GH12956 Drosophila grimshawi FBgn0120434 I
GH20479 Drosophila grimshawi FBgn0127942 I
kn Drosophila melanogaster FBgn0001319 D
GI21022 Drosophila mojavensis FBgn0143754 I
GL10656 Drosophila persimilis FBgn0148266 I
GA24435 Drosophila pseudoobscura FBgn0245832 I
GM20182 Drosophila sechellia FBgn0175065 I
GJ21945 Drosophila virilis FBgn0209060 I
GK23295 Drosophila willistoni FBgn0225257 I
GE12286 Drosophila yakuba FBgn0230042 I
EBF1 Equus caballus ENSECAG00000007964 I
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I
EBF2 Gallus gallus ENSGALG00000000242 I
EBF3 Gallus gallus ENSGALG00000010461 I
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I
Gfo_R013267 Geospiza fortis Gfo_R013267 I
GPLIN_000159400 Globodera pallida GPLIN_000159400 I
EBF1 Gorilla gorilla ENSGGOG00000000033 I
EBF2 Gorilla gorilla ENSGGOG00000001585 I
EBF4 Gorilla gorilla ENSGGOG00000015503 I
HCOI01630600 Haemonchus contortus HCOI01630600 I
HPLM_0000807901 Haemonchus placei HPLM_0000807901 I
HelroG112029 Helobdella robusta HelroG112029 I
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I
EBF4 Homo sapiens ENSG00000088881 D
EBF3 Homo sapiens ENSG00000108001 D
EBF1 Homo sapiens ENSG00000164330 D
EBF2 Homo sapiens ENSG00000221818 D
TTAC_0000009401 Hydatigera taeniaeformis TTAC_0000009401 I
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I
LOAG_18199 Loa loa LOAG_18199 I
LotgiG225788 Lottia gigantea LotgiG225788 I
EBF1 Loxodonta africana ENSLAFG00000017522 I
EBF2 Loxodonta africana ENSLAFG00000022465 I
LCUP013862 Lucilia cuprina LCUP013862 I
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I
ENSP00000405003 Macaca fascicularis ENSP00000405003 I
EBF3 Macaca mulatta ENSMMUG00000011447 I
EBF4 Macaca mulatta ENSMMUG00000021331 I
EBF1 Macaca mulatta ENSMMUG00000021696 I
EBF2 Meleagris gallopavo ENSMGAG00000000791 I
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I
MCINX016126 Melitaea cinxia MCINX016126 I
MCOS_0000276101 Mesocestoides corti MCOS_0000276101 I
EBF1 Microcebus murinus ENSMICG00000010036 I
MDOA011385 Musca domestica MDOA011385 I
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I
Ebf3 Mus musculus ENSMUSG00000010476 I
Ebf2 Mus musculus ENSMUSG00000022053 D
Ebf4 Mus musculus ENSMUSG00000053552 D
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I
EBF3 Myotis lucifugus ENSMLUG00000005478 I
EBF2 Myotis lucifugus ENSMLUG00000011509 I
EBF4 Myotis lucifugus ENSMLUG00000023832 I
NECAME_10162 Necator americanus NECAME_10162 I
NEMVEDRAFT_v1g164975 Nematostella vectensis NEMVEDRAFT_v1g164975 N
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I
EBF4 Ochotona princeps ENSOPRG00000013703 I
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I
T265_13606 Opisthorchis viverrini T265_13606 N
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I
EBF1 Oryzias latipes ENSORLG00000002342 I
ebf3a Oryzias latipes ENSORLG00000005870 I
EBF1 Oryzias latipes ENSORLG00000007471 I
EBF4 Oryzias latipes ENSORLG00000020414 I
EBF3 Otolemur garnettii ENSOGAG00000007572 I
EBF2 Otolemur garnettii ENSOGAG00000010783 I
EBF1 Otolemur garnettii ENSOGAG00000013992 I
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I
EBF2 Pan troglodytes ENSPTRG00000003058 I
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I
PHUM119360 Pediculus humanus PHUM119360 I
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I
Pvit_11383 Pogona vitticeps Pvit_11383 I
Pvit_12046 Pogona vitticeps Pvit_12046 I
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I
Ppa-unc-3 Pristionchus pacificus PPA20518 I
EBF4 Pteropus vampyrus ENSPVAG00000006830 I
Ebf2 Rattus norvegicus ENSRNOG00000011548 I
Ebf3 Rattus norvegicus ENSRNOG00000016102 I
Ebf1 Rattus norvegicus ENSRNOG00000028845 I
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I
Sjc_0015600 Schistosoma japonicum Sjc_0015600 I
SROB_0000545801 Schistosoma rodhaini SROB_0000545801 I
SMU15024001 Schmidtea mediterranea SMU15024001 I
L596_g20342 Steinernema carpocapsae L596_g20342 I
L889_g1820 Steinernema feltiae L889_g1820 I
L893_g31120 Steinernema glaseri L893_g31120 I
L898_g8304 Steinernema monticolum L898_g8304 I
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I
EBF4 Sus scrofa ENSSSCG00000007171 I
EBF2 Sus scrofa ENSSSCG00000009655 I
EBF1 Sus scrofa ENSSSCG00000017046 I
TsM_000377600 Taenia solium TsM_000377600 N
EBF1 Taeniopygia guttata ENSTGUG00000000593 I
EBF2 Taeniopygia guttata ENSTGUG00000004267 I
EBF3 Taeniopygia guttata ENSTGUG00000011600 I
EBF1 Takifugu rubripes ENSTRUG00000009320 I
ebf2 Takifugu rubripes ENSTRUG00000011528 I
ENSTSYG00000007975 Tarsius syrichta ENSTSYG00000007975 I
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I
D917_06660 Trichinella nativa D917_06660 I
EFV50386 Trichinella spiralis EFV50386 I
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I
EBF1 Tupaia belangeri ENSTBEG00000007800 I
EBF4 Tursiops truncatus ENSTTRG00000003459 I
EBF1 Tursiops truncatus ENSTTRG00000009929 I
EBF3 Tursiops truncatus ENSTTRG00000014010 I
Tal_R004164 Tyto alba Tal_R004164 I
WUBG_00630 Wuchereria bancrofti WUBG_00630 I
ebf2.S Xenopus laevis XB-GENE-971141 I
ebf4 Xenopus tropicalis XB-GENE-6030626 I
ebf3 Xenopus tropicalis XB-GENE-962543 I
ebf2 Xenopus tropicalis XB-GENE-971136 I
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I
L798_15574 Zootermopsis nevadensis L798_15574 I