nLs.2.1.2.g08363 (Litomosoides sigmodontis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) nLs.2.1.2.g08363 T174947_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.749 0.749
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.744 0.744
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.744 0.744
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.744 0.744
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.740 0.740
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.736 0.736
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.736 0.736
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t08363-RA EBF1 27 253

Links

Other EBF1 family TFs
Other Litomosoides sigmodontis TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 1.000
BTMF_0000130101 Brugia timori BTMF_0000130101 I 1.000
SINV26263 Solenopsis invicta SINV26263 I 0.958
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.956
LOAG_18199 Loa loa LOAG_18199 I 0.952
Bm6296 Brugia malayi Bm6296 I 0.942
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.942
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.936
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.929
HMEL014948 Heliconius melpomene HMEL014948 I 0.929
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.918
ASU_01180 Ascaris suum ASU_01180 I 0.901
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.900
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.900
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.886
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.886
EBF4 Homo sapiens ENSG00000088881 D 0.881
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.878
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.875
GH12956 Drosophila grimshawi FBgn0120434 I 0.875
MCINX016126 Melitaea cinxia MCINX016126 I 0.875
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.875
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.875
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.875
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.871
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.868
ACOM041529 Anopheles coluzzii ACOM041529 I 0.866
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.865
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.859
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.857
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.855
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.852
ACUA010350 Anopheles culicifacies ACUA010350 I 0.851
OFLC_0001346101 Onchocerca flexuosa OFLC_0001346101 N 0.851
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.847
CJA00446 Caenorhabditis japonica CJA00446 I 0.833
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.829
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.828
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.827
EBF3 Microcebus murinus ENSMICG00000008536 I 0.827
AGAP011437 Anopheles gambiae AGAP011437 I 0.826
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.821
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.821
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.821
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.821
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.821
Tal_R004164 Tyto alba Tal_R004164 I 0.821
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.819
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.818
AALB010330 Anopheles albimanus AALB010330 I 0.814
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.812
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.812
L889_g1820 Steinernema feltiae L889_g1820 I 0.811
L898_g8304 Steinernema monticolum L898_g8304 I 0.811
NECAME_10162 Necator americanus NECAME_10162 I 0.811
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I 0.811
AATE014419 Anopheles atroparvus AATE014419 I 0.808
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.806
CBN13270 Caenorhabditis brenneri CBN13270 I 0.804
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.804
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.800
EBF1 Equus caballus ENSECAG00000007964 I 0.800
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.800
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.800
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.800
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.800
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.799
Aan_R009520 Calypte anna Aan_R009520 I 0.798
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.798
unc-3 Caenorhabditis elegans WBGene00006743 I 0.797
L893_g31120 Steinernema glaseri L893_g31120 I 0.797
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.794
EFV50386 Trichinella spiralis EFV50386 I 0.793
D917_06660 Trichinella nativa D917_06660 I 0.793
HCOI01630600 Haemonchus contortus HCOI01630600 I 0.793
HPLM_0000807901 Haemonchus placei HPLM_0000807901 I 0.793
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.792
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.790
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.789
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.787
EBF1 Felis catus ENSFCAG00000008547 I 0.785
CRE15310 Caenorhabditis remanei CRE15310 I 0.784
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.784
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.776
kn Drosophila melanogaster FBgn0001319 D 0.776
GG22397 Drosophila erecta FBgn0114569 I 0.776
GM20182 Drosophila sechellia FBgn0175065 I 0.776
GE12286 Drosophila yakuba FBgn0230042 I 0.776
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.775
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.771
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.771
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.770
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.767
NV10306 Nasonia vitripennis NV10306 I 0.764
AAEL003436 Aedes aegypti AAEL003436 I 0.762
CBG07590 Caenorhabditis briggsae CBG07590 I 0.762
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.758
EBF1 Oryzias latipes ENSORLG00000007471 I 0.758
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.758
ADAC003479 Anopheles darlingi ADAC003479 I 0.757
ebf1a Danio rerio ENSDARG00000099849 I 0.753
EBF4 Oryzias latipes ENSORLG00000020414 I 0.753
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.753
MDOA011385 Musca domestica MDOA011385 I 0.753
TC001270 Tribolium castaneum TC001270 I 0.750
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.750
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.749
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.749
EBF3 Homo sapiens ENSG00000108001 D 0.749
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.749
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.749
Ebf3 Mus musculus ENSMUSG00000010476 I 0.749
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.749
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.749
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.749
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.749
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.749
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.749
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.749
L798_15574 Zootermopsis nevadensis L798_15574 I 0.749
PHUM119360 Pediculus humanus PHUM119360 I 0.749
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.749
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.747
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.747
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.747
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.745
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.744
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.744
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.744
KGM_09934 Danaus plexippus KGM_09934 I 0.744
Aan_R007097 Calypte anna Aan_R007097 I 0.743
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.740
EBF4 Bos taurus ENSBTAG00000037757 I 0.740
EBF4 Canis familiaris ENSCAFG00000006631 I 0.740
ebf1b Danio rerio ENSDARG00000069196 I 0.740
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.740
EBF1 Gallus gallus ENSGALG00000003699 I 0.740
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.740
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.740
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.740
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.740
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.740
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.740
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.740
LotgiG225788 Lottia gigantea LotgiG225788 I 0.740
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.740
BXY_1639700 Bursaphelenchus xylophilus BXY_1639700 I 0.740
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.736
EBF2 Bos taurus ENSBTAG00000040390 I 0.736
EBF2 Canis familiaris ENSCAFG00000008918 I 0.736
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.736
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.736
EBF2 Homo sapiens ENSG00000221818 D 0.736
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.736
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.736
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.736
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.736
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.736
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.736
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.736
Ebf2 Mus musculus ENSMUSG00000022053 D 0.736
Ebf4 Mus musculus ENSMUSG00000053552 D 0.736
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.736
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.736
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.736
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.736
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.736
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.736
ebf3a Oryzias latipes ENSORLG00000005870 I 0.736
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.736
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.736
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.736
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.736
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.736
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.736
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.736
EBF2 Sus scrofa ENSSSCG00000009655 I 0.736
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.736
GF11778 Drosophila ananassae FBgn0088818 I 0.736
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.736
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.736
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.736
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.736
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.735
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.735
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.732
EBF1 Bos taurus ENSBTAG00000037508 I 0.732
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.732
ebf3a Danio rerio ENSDARG00000100244 I 0.732
EBF1 Echinops telfairi ENSETEG00000011711 I 0.732
EBF1 Homo sapiens ENSG00000164330 D 0.732
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.732
Ebf1 Mus musculus ENSMUSG00000057098 D 0.732
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.732
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.732
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.732
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.732
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.732
CapteG93575 Capitella teleta CapteG93575 I 0.731
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.731
EBF1 Canis familiaris ENSCAFG00000017318 I 0.731
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.731
GL10656 Drosophila persimilis FBgn0148266 I 0.731
GK23295 Drosophila willistoni FBgn0225257 I 0.731
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.731
RSKR_0000832900 Rhabditophanes kr3021 RSKR_0000832900 I 0.731
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.730
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.729
SMAR000842 Strigamia maritima SMAR000842 I 0.728
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.727
EBF4 Equus caballus ENSECAG00000010003 I 0.727
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.727
EBF2 Gallus gallus ENSGALG00000000242 I 0.727
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.727
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.727
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.727
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.727
EBF1 Oryzias latipes ENSORLG00000002342 I 0.727
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.727
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.727
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.727
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.727
GJ21945 Drosophila virilis FBgn0209060 I 0.727
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.727
ebf3.L Xenopus laevis XB-GENE-962547 I 0.727
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.727
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.726
D918_06798 Trichuris suis D918_06798 I 0.726
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.723
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.723
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.723
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.722
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.722
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.722
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.722
EBF4 Sus scrofa ENSSSCG00000007171 I 0.722
GH20479 Drosophila grimshawi FBgn0127942 I 0.722
ebf2.S Xenopus laevis XB-GENE-971141 I 0.722
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.719
EBF2 Equus caballus ENSECAG00000014179 I 0.719
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.719
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.719
EBF4 Procavia capensis ENSPCAG00000011947 I 0.719
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.719
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.719
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.719
ebf2 Danio rerio ENSDARG00000042525 I 0.718
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.718
EBF1 Microcebus murinus ENSMICG00000010036 I 0.718
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.718
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.718
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.718
HelroG112029 Helobdella robusta HelroG112029 I 0.718
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.717
ebf3b Danio rerio ENSDARG00000091287 I 0.714
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.714
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.714
GI21022 Drosophila mojavensis FBgn0143754 I 0.714
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.710
ebf2 Oryzias latipes ENSORLG00000006408 I 0.710
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.710
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.710
GB42304 Apis mellifera GB42304 I 0.709
ACOM041538 Anopheles coluzzii ACOM041538 I 0.702
AMEM016790 Anopheles merus AMEM016790 I 0.702
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.700
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.700