ebf3.L (Xenopus laevis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) XB-GENE-962547 T174859_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.974 0.974
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.935 0.935
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.935 0.935
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.935 0.935
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.887 0.887
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.883 0.883
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.874 0.874
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAC15659 EBF1 17 247
AAI70260 EBF1 17 247

Links

Other EBF1 family TFs
Other Xenopus laevis TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 1.000
EBF1 Equus caballus ENSECAG00000007964 I 1.000
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 1.000
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 1.000
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 1.000
Pvit_12046 Pogona vitticeps Pvit_12046 I 1.000
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.991
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.991
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.991
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.978
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.975
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.974
ebf3a Danio rerio ENSDARG00000100244 I 0.974
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.974
EBF3 Homo sapiens ENSG00000108001 D 0.974
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.974
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.974
Ebf3 Mus musculus ENSMUSG00000010476 I 0.974
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.974
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.974
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.974
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.974
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.974
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.970
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.970
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.953
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.952
Aan_R007097 Calypte anna Aan_R007097 I 0.952
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.952
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.948
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.948
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.944
ebf3a Oryzias latipes ENSORLG00000005870 I 0.944
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.944
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.944
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.944
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.939
EBF1 Bos taurus ENSBTAG00000037508 I 0.935
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.935
EBF1 Echinops telfairi ENSETEG00000011711 I 0.935
EBF1 Homo sapiens ENSG00000164330 D 0.935
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.935
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.935
Ebf1 Mus musculus ENSMUSG00000057098 D 0.935
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.935
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.935
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.935
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.935
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.935
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.935
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.931
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.931
EBF1 Gallus gallus ENSGALG00000003699 I 0.931
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.931
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.931
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.926
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.926
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.926
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.926
EBF4 Oryzias latipes ENSORLG00000020414 I 0.926
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.926
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.926
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.922
EBF1 Canis familiaris ENSCAFG00000017318 I 0.922
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.922
ebf1a Danio rerio ENSDARG00000099849 I 0.922
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.922
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.922
EBF1 Oryzias latipes ENSORLG00000007471 I 0.922
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.922
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.922
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.913
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.913
ebf1b Danio rerio ENSDARG00000069196 I 0.909
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.909
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.905
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.905
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.905
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.905
EBF4 Bos taurus ENSBTAG00000037757 I 0.887
EBF4 Canis familiaris ENSCAFG00000006631 I 0.887
EBF4 Homo sapiens ENSG00000088881 D 0.887
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.887
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.887
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.887
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.887
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.887
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.883
EBF4 Equus caballus ENSECAG00000010003 I 0.883
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.883
Ebf4 Mus musculus ENSMUSG00000053552 D 0.883
EBF1 Oryzias latipes ENSORLG00000002342 I 0.883
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.883
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.883
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.879
EBF2 Bos taurus ENSBTAG00000040390 I 0.879
EBF2 Canis familiaris ENSCAFG00000008918 I 0.879
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.879
EBF2 Equus caballus ENSECAG00000014179 I 0.879
EBF2 Homo sapiens ENSG00000221818 D 0.879
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.879
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.879
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.879
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.879
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.879
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.879
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.879
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.879
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.879
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.879
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.879
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.879
EBF2 Sus scrofa ENSSSCG00000009655 I 0.879
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.874
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.874
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.874
EBF2 Gallus gallus ENSGALG00000000242 I 0.874
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.874
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.874
Ebf2 Mus musculus ENSMUSG00000022053 D 0.874
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.874
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.874
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.870
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.870
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.870
EBF4 Procavia capensis ENSPCAG00000011947 I 0.867
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.866
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.866
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.866
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.866
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.861
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.857
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.857
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.857
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.857
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.857
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.857
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.853
ebf2 Oryzias latipes ENSORLG00000006408 I 0.853
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.853
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.853
ebf2.S Xenopus laevis XB-GENE-971141 I 0.853
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.850
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.840
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.840
EBF4 Felis catus ENSFCAG00000014453 I 0.831
EBF1 Microcebus murinus ENSMICG00000010036 I 0.831
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.831
EBF1 Felis catus ENSFCAG00000008547 I 0.827
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.827
EBF1 Procavia capensis ENSPCAG00000013495 I 0.824
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.819
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.818
ebf2 Danio rerio ENSDARG00000042525 I 0.818
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.818
EBF3 Echinops telfairi ENSETEG00000014060 I 0.818
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.818
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.818
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.818
EBF4 Sus scrofa ENSSSCG00000007171 I 0.818
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.814
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.814
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.810
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.810
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.805
Aan_R009520 Calypte anna Aan_R009520 I 0.805
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.805
ebf3b Danio rerio ENSDARG00000091287 I 0.801
EBF2 Felis catus ENSFCAG00000003607 I 0.801
LotgiG225788 Lottia gigantea LotgiG225788 I 0.801
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.801
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.797
CapteG93575 Capitella teleta CapteG93575 I 0.792
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.792
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.788
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.788
AAEL003436 Aedes aegypti AAEL003436 I 0.785
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.784
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.779
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.779
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.779
EFV50386 Trichinella spiralis EFV50386 I 0.771
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.771
D917_06660 Trichinella nativa D917_06660 I 0.771
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.766
TC001270 Tribolium castaneum TC001270 I 0.762
PHUM119360 Pediculus humanus PHUM119360 I 0.758
MDOA011385 Musca domestica MDOA011385 I 0.758
ASU_01180 Ascaris suum ASU_01180 I 0.757
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.754
KGM_09934 Danaus plexippus KGM_09934 I 0.753
NV10306 Nasonia vitripennis NV10306 I 0.749
L798_15574 Zootermopsis nevadensis L798_15574 I 0.745
kn Drosophila melanogaster FBgn0001319 D 0.740
GG22397 Drosophila erecta FBgn0114569 I 0.740
GM20182 Drosophila sechellia FBgn0175065 I 0.740
GE12286 Drosophila yakuba FBgn0230042 I 0.740
GB42304 Apis mellifera GB42304 I 0.740
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.740
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.736
GF11778 Drosophila ananassae FBgn0088818 I 0.736
GH20479 Drosophila grimshawi FBgn0127942 I 0.736
GL10656 Drosophila persimilis FBgn0148266 I 0.736
GJ21945 Drosophila virilis FBgn0209060 I 0.736
GK23295 Drosophila willistoni FBgn0225257 I 0.736
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.736
HelroG112029 Helobdella robusta HelroG112029 I 0.736
LCUP013861 Lucilia cuprina LCUP013861 I 0.731
AGAP011437 Anopheles gambiae AGAP011437 I 0.727
GI21022 Drosophila mojavensis FBgn0143754 I 0.727
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.727
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.727
Bm6296 Brugia malayi Bm6296 I 0.723
LOAG_18199 Loa loa LOAG_18199 I 0.723
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.723
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.723
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.723
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.723
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.723
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.719
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.719
L889_g1820 Steinernema feltiae L889_g1820 I 0.719
L893_g31120 Steinernema glaseri L893_g31120 I 0.719
L898_g8304 Steinernema monticolum L898_g8304 I 0.719
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.714
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.714
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.710
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.710
unc-3 Caenorhabditis elegans WBGene00006743 I 0.707
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.706
CBN13270 Caenorhabditis brenneri CBN13270 I 0.706
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.706
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
CRE15310 Caenorhabditis remanei CRE15310 I 0.701
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.701
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.701
RSKR_0000832900 Rhabditophanes kr3021 RSKR_0000832900 I 0.701