Ogr13832 (Ophisaurus gracilis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Ogr13832 T174831_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.923 0.923
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.863 0.863
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.863 0.863
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.863 0.863
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.798 0.798
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.787 0.787
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.787 0.787
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr13832 EBF1 3 187

Links

Other EBF1 family TFs
Other Ophisaurus gracilis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV26263 Solenopsis invicta SINV26263 I 0.958
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.935
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.929
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.929
EBF1 Equus caballus ENSECAG00000007964 I 0.929
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.929
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.921
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.918
EBF3 Echinops telfairi ENSETEG00000014060 I 0.918
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.913
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.913
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.912
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.905
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.905
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.899
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.888
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.885
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.883
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.868
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.863
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.863
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.862
Myotis_brandtii_EBF3_10024821 Myotis brandtii Myotis_brandtii_EBF3_10024821 I 0.857
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.857
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.847
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.845
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.844
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.844
ENSAMXG00000012646 Astyanax mexicanus ENSAMXG00000012646 I 0.843
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.842
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.842
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.842
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.842
ebf1b Danio rerio ENSDARG00000069196 I 0.825
RPRC005513 Rhodnius prolixus RPRC005513 I 0.821
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.820
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.817
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.813
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.809
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.803
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.803
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.803
EBF2 Gallus gallus ENSGALG00000000242 I 0.803
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.803
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.803
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.798
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.798
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.798
HelroG147258 Helobdella robusta HelroG147258 I 0.798
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.795
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.792
Ebf4 Mus musculus ENSMUSG00000053552 D 0.787
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.781
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.781
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.781
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.781
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.781
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.781
SMAR000842 Strigamia maritima SMAR000842 I 0.778
ISCW021819 Ixodes scapularis ISCW021819 I 0.777
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.776
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.770
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.770
AFUN004907 Anopheles funestus AFUN004907 I 0.769
ENSBTAG00000047164 Bos taurus ENSBTAG00000047164 I 0.768
Cmyd_10009831 Chelonia mydas Cmyd_10009831 I 0.768
D918_06798 Trichuris suis D918_06798 I 0.768
ACOM041538 Anopheles coluzzii ACOM041538 I 0.764
AMEM016790 Anopheles merus AMEM016790 I 0.764
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.759
AARA002866 Anopheles arabiensis AARA002866 I 0.753
MESCA011260 Megaselia scalaris MESCA011260 I 0.747
ACHR005921 Anopheles christyi ACHR005921 I 0.744
ebf2.S Xenopus laevis XB-GENE-971141 I 0.743
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.743
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.743
LCUP013861 Lucilia cuprina LCUP013861 I 0.742
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.736
ASTEI11507 Anopheles stephensi ASTEI11507 I 0.734
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.732
EBF3 Homo sapiens ENSG00000108001 D 0.732
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.732
LotgiG225788 Lottia gigantea LotgiG225788 I 0.732
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.732
Ebf3 Mus musculus ENSMUSG00000010476 I 0.732
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.732
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.732
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.732
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.732
EBF4 Procavia capensis ENSPCAG00000011947 I 0.730
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.727
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.727
Aan_R007097 Calypte anna Aan_R007097 I 0.726
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.725
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.723
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.723
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.719
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.715
ebf3.L Xenopus laevis XB-GENE-962547 I 0.714
ebf3a Danio rerio ENSDARG00000100244 I 0.714
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.710
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.710
GH25280 Drosophila grimshawi FBgn0132735 I 0.701
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.700
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.700