ENSTNIG00000017063 (Tetraodon nigroviridis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSTNIG00000017063 T174711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.947 0.947
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.947 0.947
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.947 0.947
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.917 0.917
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.846 0.846
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.828 0.828
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.811 0.811
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020195 EBF1 12 180

Links

Other EBF1 family TFs
Other Tetraodon nigroviridis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV26263 Solenopsis invicta SINV26263 I 0.958
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.956
EBF1 Equus caballus ENSECAG00000007964 I 0.947
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.947
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.947
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.947
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.941
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.939
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.931
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.929
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.923
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.911
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.911
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.905
ENSAMXG00000012646 Astyanax mexicanus ENSAMXG00000012646 I 0.890
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.888
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.888
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.887
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.885
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.881
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.842
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.835
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.833
Cmyd_10009831 Chelonia mydas Cmyd_10009831 I 0.832
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.832
RPRC005513 Rhodnius prolixus RPRC005513 I 0.821
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.821
HelroG147258 Helobdella robusta HelroG147258 I 0.819
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.817
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.817
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.814
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.811
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.806
Myotis_brandtii_EBF3_10024821 Myotis brandtii Myotis_brandtii_EBF3_10024821 I 0.806
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.805
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.800
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.792
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.789
PXEA_0001364901 Protopolystoma xenopodis PXEA_0001364901 I 0.789
EBF3 Echinops telfairi ENSETEG00000014060 I 0.786
SMAR000842 Strigamia maritima SMAR000842 I 0.784
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.782
LotgiG225788 Lottia gigantea LotgiG225788 I 0.781
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.780
ISCW021819 Ixodes scapularis ISCW021819 I 0.777
ebf2.S Xenopus laevis XB-GENE-971141 I 0.769
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.766
ACOM041538 Anopheles coluzzii ACOM041538 I 0.758
AFUN004907 Anopheles funestus AFUN004907 I 0.758
AMEM016790 Anopheles merus AMEM016790 I 0.758
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.753
MESCA011260 Megaselia scalaris MESCA011260 I 0.747
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.746
HelroG112029 Helobdella robusta HelroG112029 I 0.746
AARA002866 Anopheles arabiensis AARA002866 I 0.742
MCINX016127 Melitaea cinxia MCINX016127 I 0.741
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.741
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.740
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.738
D918_06798 Trichuris suis D918_06798 I 0.738
EBF4 Echinops telfairi ENSETEG00000015956 I 0.737
SMTD_0000506201 Schistosoma mattheei SMTD_0000506201 I 0.734
LCUP013861 Lucilia cuprina LCUP013861 I 0.731
ACHR005921 Anopheles christyi ACHR005921 I 0.731
EBF4 Procavia capensis ENSPCAG00000011947 I 0.730
EBF1 Oryzias latipes ENSORLG00000007471 I 0.727
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.727
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.723
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.723
ASTEI11507 Anopheles stephensi ASTEI11507 I 0.722
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.719
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I 0.719
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.714
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.710
MDOA011385 Musca domestica MDOA011385 I 0.710
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.708
ENSSSCG00000025415 Sus scrofa ENSSSCG00000025415 I 0.704
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.704
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.700