CBN13270 (Caenorhabditis brenneri)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) CBN13270 T174466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.737 0.737
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.732 0.732
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.732 0.732
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.728 0.728
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.728 0.728
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.728 0.728
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.728 0.728
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN13270 EBF1 25 249

Links

Other EBF1 family TFs
Other Caenorhabditis brenneri TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE15310 Caenorhabditis remanei CRE15310 I 0.942
CBG07590 Caenorhabditis briggsae CBG07590 I 0.920
unc-3 Caenorhabditis elegans WBGene00006743 I 0.901
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.873
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.873
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.870
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.868
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.868
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.866
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
EBF4 Homo sapiens ENSG00000088881 D 0.856
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.854
AGAP011437 Anopheles gambiae AGAP011437 I 0.821
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.811
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.808
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.807
EBF3 Microcebus murinus ENSMICG00000008536 I 0.807
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.806
ASU_01180 Ascaris suum ASU_01180 I 0.806
NECAME_10162 Necator americanus NECAME_10162 I 0.804
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.804
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I 0.804
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.803
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.801
Bm6296 Brugia malayi Bm6296 I 0.799
LOAG_18199 Loa loa LOAG_18199 I 0.799
HCOI01630600 Haemonchus contortus HCOI01630600 I 0.799
HPLM_0000807901 Haemonchus placei HPLM_0000807901 I 0.799
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.793
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.790
Aan_R009520 Calypte anna Aan_R009520 I 0.788
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.788
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.786
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.783
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.779
NV10306 Nasonia vitripennis NV10306 I 0.777
L889_g1820 Steinernema feltiae L889_g1820 I 0.777
L898_g8304 Steinernema monticolum L898_g8304 I 0.777
GH12956 Drosophila grimshawi FBgn0120434 I 0.775
MCINX016126 Melitaea cinxia MCINX016126 I 0.775
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.772
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.772
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.772
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.772
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.768
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.768
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.768
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.768
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.766
EFV50386 Trichinella spiralis EFV50386 I 0.763
D917_06660 Trichinella nativa D917_06660 I 0.763
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.763
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.763
EBF1 Felis catus ENSFCAG00000008547 I 0.761
L893_g31120 Steinernema glaseri L893_g31120 I 0.759
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.757
AALB010330 Anopheles albimanus AALB010330 I 0.757
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.756
AAEL003436 Aedes aegypti AAEL003436 I 0.744
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.743
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.741
L798_15574 Zootermopsis nevadensis L798_15574 I 0.741
PHUM119360 Pediculus humanus PHUM119360 I 0.741
MDOA011385 Musca domestica MDOA011385 I 0.741
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.737
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.737
EBF2 Gallus gallus ENSGALG00000000242 I 0.737
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.737
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.737
kn Drosophila melanogaster FBgn0001319 D 0.737
GG22397 Drosophila erecta FBgn0114569 I 0.737
GL10656 Drosophila persimilis FBgn0148266 I 0.737
GM20182 Drosophila sechellia FBgn0175065 I 0.737
GK23295 Drosophila willistoni FBgn0225257 I 0.737
GE12286 Drosophila yakuba FBgn0230042 I 0.737
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.737
GB42304 Apis mellifera GB42304 I 0.737
KGM_09934 Danaus plexippus KGM_09934 I 0.737
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.737
BXY_1639700 Bursaphelenchus xylophilus BXY_1639700 I 0.737
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.733
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.732
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.732
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.732
EBF4 Bos taurus ENSBTAG00000037757 I 0.732
EBF2 Bos taurus ENSBTAG00000040390 I 0.732
EBF4 Canis familiaris ENSCAFG00000006631 I 0.732
EBF2 Canis familiaris ENSCAFG00000008918 I 0.732
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.732
ebf1a Danio rerio ENSDARG00000099849 I 0.732
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.732
EBF2 Homo sapiens ENSG00000221818 D 0.732
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.732
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.732
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.732
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.732
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.732
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.732
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.732
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.732
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.732
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.732
Ebf2 Mus musculus ENSMUSG00000022053 D 0.732
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.732
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.732
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.732
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.732
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.732
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.732
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.732
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.732
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.732
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.732
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.732
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.732
EBF2 Sus scrofa ENSSSCG00000009655 I 0.732
GF11778 Drosophila ananassae FBgn0088818 I 0.732
GH20479 Drosophila grimshawi FBgn0127942 I 0.732
GJ21945 Drosophila virilis FBgn0209060 I 0.732
LotgiG225788 Lottia gigantea LotgiG225788 I 0.732
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.732
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.728
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.728
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.728
EBF3 Homo sapiens ENSG00000108001 D 0.728
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.728
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.728
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.728
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.728
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.728
Ebf3 Mus musculus ENSMUSG00000010476 I 0.728
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.728
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.728
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.728
ebf3a Oryzias latipes ENSORLG00000005870 I 0.728
EBF1 Oryzias latipes ENSORLG00000007471 I 0.728
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.728
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.728
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.728
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.728
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.728
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.728
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.728
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.728
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.728
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.728
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.728
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.728
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.725
EBF1 Equus caballus ENSECAG00000007964 I 0.725
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.725
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.725
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.725
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.725
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.723
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.723
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.723
ebf1b Danio rerio ENSDARG00000069196 I 0.723
ebf3a Danio rerio ENSDARG00000100244 I 0.723
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.723
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.723
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.723
Ebf4 Mus musculus ENSMUSG00000053552 D 0.723
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.723
EBF4 Oryzias latipes ENSORLG00000020414 I 0.723
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.723
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.723
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.723
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.723
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.723
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.723
Aan_R007097 Calypte anna Aan_R007097 I 0.723
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.723
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.723
D918_06798 Trichuris suis D918_06798 I 0.720
ebf2 Danio rerio ENSDARG00000042525 I 0.719
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.719
GI21022 Drosophila mojavensis FBgn0143754 I 0.719
TC001270 Tribolium castaneum TC001270 I 0.719
ebf2.S Xenopus laevis XB-GENE-971141 I 0.719
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.715
CapteG93575 Capitella teleta CapteG93575 I 0.714
EBF1 Canis familiaris ENSCAFG00000017318 I 0.714
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.714
EBF4 Procavia capensis ENSPCAG00000011947 I 0.714
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.714
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.714
ACOM041538 Anopheles coluzzii ACOM041538 I 0.714
AMEM016790 Anopheles merus AMEM016790 I 0.714
EBF2 Equus caballus ENSECAG00000014179 I 0.710
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.710
EBF1 Gallus gallus ENSGALG00000003699 I 0.710
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.710
EBF1 Oryzias latipes ENSORLG00000002342 I 0.710
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.710
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.710
SMAR000842 Strigamia maritima SMAR000842 I 0.710
LCUP013861 Lucilia cuprina LCUP013861 I 0.710
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.710
OFLC_0001346101 Onchocerca flexuosa OFLC_0001346101 N 0.709
EBF1 Bos taurus ENSBTAG00000037508 I 0.706
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.706
EBF4 Equus caballus ENSECAG00000010003 I 0.706
EBF1 Echinops telfairi ENSETEG00000011711 I 0.706
EBF1 Homo sapiens ENSG00000164330 D 0.706
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.706
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.706
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.706
Ebf1 Mus musculus ENSMUSG00000057098 D 0.706
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.706
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.706
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.706
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.706
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.706
ebf3.L Xenopus laevis XB-GENE-962547 I 0.706
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.705
EBF1 Microcebus murinus ENSMICG00000010036 I 0.705
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.705
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.705
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.705
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.705
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.703
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.701
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.701
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.701
ebf2 Oryzias latipes ENSORLG00000006408 I 0.701
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.701
EBF4 Sus scrofa ENSSSCG00000007171 I 0.701
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.701