ENSOCUG00000022716 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000022716 T164689_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.867 0.867
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.867 0.867
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.867 0.867
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.867 0.867
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000016726 CSD 44 92

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.756
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.800
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.867
ENSAMEG00000008685 Ailuropoda melanoleuca ENSAMEG00000008685 I 0.711
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.867
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.923
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.867
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.867
AALB005039 Anopheles albimanus AALB005039 I 0.733
AARA007412 Anopheles arabiensis AARA007412 I 0.733
ACHR003797 Anopheles christyi ACHR003797 I 0.733
ACOM024661 Anopheles coluzzii ACOM024661 I 0.733
ACUA007180 Anopheles culicifacies ACUA007180 I 0.733
AEPI000589 Anopheles epiroticus AEPI000589 I 0.733
AFUN005441 Anopheles funestus AFUN005441 I 0.733
AGAP006108 Anopheles gambiae AGAP006108 I 0.733
AMEC011905 Anopheles melas AMEC011905 I 0.733
AMEM010049 Anopheles merus AMEM010049 I 0.733
AMIN009954 Anopheles minimus AMIN009954 I 0.733
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.733
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.733
Afo_R006672 Aptenodytes forsteri Afo_R006672 I 0.812
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.867
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.867
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.867
ENSP00000389639-D2 Bos grunniens ENSP00000389639-D2 I 0.867
YBX3 Bos taurus ENSBTAG00000009663 I 0.867
YBX1 Bos taurus ENSBTAG00000017368 I 0.867
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.844
Bm3781 Brugia malayi Bm3781 I 0.756
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.867
Brh_R010004 Buceros rhinoceros Brh_R010004 I 0.812
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.867
ENSCJAG00000007407 Callithrix jacchus ENSCJAG00000007407 I 0.778
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.889
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.867
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.800
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.822
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.822
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.822
Aan_R001440 Calypte anna Aan_R001440 I 0.867
Aan_R014295 Calypte anna Aan_R014295 I 0.867
YBX1 Canis familiaris ENSCAFG00000002541 I 0.867
YBX3 Canis familiaris ENSCAFG00000013401 I 0.867
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.756
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.756
CapteG105284 Capitella teleta CapteG105284 I 0.733
CapteG121832 Capitella teleta CapteG121832 I 0.765
CapteG166603 Capitella teleta CapteG166603 I 0.822
CapteG48958 Capitella teleta CapteG48958 I 0.733
CapteG58124 Capitella teleta CapteG58124 I 0.711
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.867
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.867
Cmyd_10000339 Chelonia mydas Cmyd_10000339 I 0.756
Cmyd_10002115 Chelonia mydas Cmyd_10002115 I 0.972
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.973
ENSCSAG00000001168 Chlorocebus sabaeus ENSCSAG00000001168 I 0.796
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.867
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.867
CLEC013418 Cimex lectularius CLEC013418 I 0.778
CpipJ_CPIJ002248 Culex pipiens CpipJ_CPIJ002248 I 0.784
CPIJ002248 Culex quinquefasciatus CPIJ002248 I 0.784
ybx1 Danio rerio ENSDARG00000004757 I 0.867
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.756
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.867
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.756
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.756
YBX3 Echinops telfairi ENSETEG00000002557 I 0.867
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.756
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.867
YBX3 Equus caballus ENSECAG00000013777 I 0.867
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.867
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.867
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.867
ENSFCAG00000022604 Felis catus ENSFCAG00000022604 I 0.812
YBX3 Felis catus ENSFCAG00000027748 I 0.867
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.867
ENSFALG00000010305 Ficedula albicollis ENSFALG00000010305 I 0.722
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.844
YBX1 Gallus gallus ENSGALG00000004848 I 0.867
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.867
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.867
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.867
Gfo_R009480 Geospiza fortis Gfo_R009480 I 0.812
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.756
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.867
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.796
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.822
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.814
ENSGGOG00000023840 Gorilla gorilla ENSGGOG00000023840 I 0.857
HelroG133388 Helobdella robusta HelroG133388 I 0.711
YBX3 Homo sapiens ENSG00000060138 I 0.867
YBX1 Homo sapiens ENSG00000065978 D 0.867
ENSSTOG00000000116 Ictidomys tridecemlineatus ENSSTOG00000000116 I 0.812
ENSSTOG00000002108 Ictidomys tridecemlineatus ENSSTOG00000002108 I 0.796
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.756
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.756
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.756
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.867
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.867
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.844
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.733
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.756
LOAG_17966 Loa loa LOAG_17966 I 0.756
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.867
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.745
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.867
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.923
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.867
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.867
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.867
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.811
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.867
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.867
YBX2 Microcebus murinus ENSMICG00000012453 I 0.844
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.867
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.867
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.867
MDOA013639 Musca domestica MDOA013639 I 0.756
ENSMPUG00000010386 Mustela putorius furo ENSMPUG00000010386 I 0.844
ENSMPUG00000013922 Mustela putorius furo ENSMPUG00000013922 I 0.867
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.756
Ybx1 Mus musculus ENSMUSG00000028639 I 0.867
Ybx3 Mus musculus ENSMUSG00000030189 I 0.867
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.792
Myotis_brandtii_YBX2_10021025 Myotis brandtii Myotis_brandtii_YBX2_10021025 I 0.844
YBX3 Myotis lucifugus ENSMLUG00000007476 I 0.796
ENSMLUG00000024638 Myotis lucifugus ENSMLUG00000024638 I 0.878
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 0.950
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.867
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.756
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.756
Ogr02658 Ophisaurus gracilis Ogr02658 I 0.796
T265_06248 Opisthorchis viverrini T265_06248 I 0.711
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.867
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.756
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.867
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.867
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.912
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 I 0.867
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 I 0.950
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 I 0.800
ENSOCUG00000028047 Oryctolagus cuniculus ENSOCUG00000028047 I 0.812
ybx1 Oryzias latipes ENSORLG00000004225 I 0.867
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.867
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.778
ENSOGAG00000024681 Otolemur garnettii ENSOGAG00000024681 I 0.756
ENSOGAG00000030360 Otolemur garnettii ENSOGAG00000030360 I 0.733
ENSOGAG00000030653 Otolemur garnettii ENSOGAG00000030653 I 0.756
ENSOGAG00000031268 Otolemur garnettii ENSOGAG00000031268 I 0.711
ENSOGAG00000032929 Otolemur garnettii ENSOGAG00000032929 I 0.711
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.867
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.867
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.780
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.822
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.867
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.867
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.867
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.867
PHUM156710 Pediculus humanus PHUM156710 I 0.778
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.867
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.867
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.867
Pvit_07856 Pogona vitticeps Pvit_07856 I 0.731
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.867
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.867
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.711
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.867
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.867
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.867
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.867
RPRC001993 Rhodnius prolixus RPRC001993 I 0.756
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.867
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.929
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.867
SINV21160 Solenopsis invicta SINV21160 I 0.723
YBX2 Sorex araneus ENSSARG00000000488 I 0.822
ENSSARG00000012628 Sorex araneus ENSSARG00000012628 I 0.711
L596_g21676 Steinernema carpocapsae L596_g21676 I 0.711
L893_g29692 Steinernema glaseri L893_g29692 I 0.711
L892_g19487 Steinernema scapterisci L892_g19487 I 0.711
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.711
YBX3 Sus scrofa ENSSSCG00000000633 I 0.867
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.867
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.867
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.867
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.867
D918_04890 Trichuris suis D918_04890 I 0.756
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.867
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.830
Tal_R003478 Tyto alba Tal_R003478 I 0.946
Tal_R011198 Tyto alba Tal_R011198 I 0.812
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.867
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.844
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.756
AAH42217 Xenopus laevis AAH42217 I 0.867
AAI30161 Xenopus laevis AAI30161 I 0.867
CAA42778 Xenopus laevis CAA42778 I 0.867
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.889
ybx1.S Xenopus laevis XB-GENE-865405 I 0.867
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.867
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.867