chr6.CM0045.280.nd (Lotus japonicus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 chr6.CM0045.280.nd T165604_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr6.CM0045.280.nd CSD 6 72

Links

Other CSD family TFs
Other Lotus japonicus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.712
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.712
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.727
Cla016088 Citrullus lanatus Cla016088 N 0.712
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.712
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.758
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.788
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.864
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.727
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.758
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.712
mgf001526m Mimulus guttatus mgf001526m N 0.742
mgf014458m Mimulus guttatus mgf014458m N 0.742
mgf015980m Mimulus guttatus mgf015980m I 0.773
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.712
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.712
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.712
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.712
Pm020837 Prunus mume Pm020837 I 0.712
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.727
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.712
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.788
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.712