CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000006156
(
Gadus morhua
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSGMOG00000006156
T166068_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.935
0.935
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.935
0.935
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.935
0.935
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.935
0.935
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.935
0.935
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.935
0.935
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.935
0.935
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.935
0.935
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.935
0.935
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.935
0.935
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.935
0.935
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.935
0.935
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.935
0.935
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.759
0.759
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.759
0.759
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000006584
CSL
1
110
PPPCVYLMGSGWKKKKEQMEQDGCTEQESQPCAFIGIGNSEQEMQQLNLEGKNFCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Gadus morhua
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG017359.1
Alligator sinensis
Alligator_sinensis_CCG017359.1
I
0.000
ENSAPLG00000007946
Anas platyrhynchos
ENSAPLG00000007946
I
0.000
HDX
Anolis carolinensis
ENSACAG00000014116
I
0.000
Afo_R014150
Aptenodytes forsteri
Afo_R014150
I
0.000
Brh_R002803
Buceros rhinoceros
Brh_R002803
I
0.000
HDX
Callithrix jacchus
ENSCJAG00000008295
I
0.000
Aan_R004747
Calypte anna
Aan_R004747
I
0.000
HDX
Canis familiaris
ENSCAFG00000017380
I
0.000
HDX
Cavia porcellus
ENSCPOG00000014501
I
0.000
Cmyd_10021519
Chelonia mydas
Cmyd_10021519
I
0.000
ENSCSAG00000010546
Chlorocebus sabaeus
ENSCSAG00000010546
I
0.000
hdx
Danio rerio
ENSDARG00000079382
I
0.000
HDX
Echinops telfairi
ENSETEG00000018031
I
0.000
HDX
Equus caballus
ENSECAG00000024862
I
0.000
HDX
Erinaceus europaeus
ENSEEUG00000011626
I
0.000
HDX
Felis catus
ENSFCAG00000005781
I
0.000
ENSFALG00000004050
Ficedula albicollis
ENSFALG00000004050
I
0.000
ENSGMOG00000004501
Gadus morhua
ENSGMOG00000004501
I
0.000
HDX
Gallus gallus
ENSGALG00000007041
I
0.000
hdx
Gasterosteus aculeatus
ENSGACG00000018543
I
0.000
Gfo_R008526
Geospiza fortis
Gfo_R008526
I
0.000
HDX
Homo sapiens
ENSG00000165259
D
0.000
ENSLACG00000001553
Latimeria chalumnae
ENSLACG00000001553
I
0.000
ENSLOCG00000015046
Lepisosteus oculatus
ENSLOCG00000015046
I
0.000
HDX
Loxodonta africana
ENSLAFG00000028655
I
0.000
ENSP00000297977
Macaca fascicularis
ENSP00000297977
I
0.000
HDX
Macaca mulatta
ENSMMUG00000020536
I
0.000
ENSMEUG00000003811
Macropus eugenii
ENSMEUG00000003811
I
0.000
HDX
Meleagris gallopavo
ENSMGAG00000004732
I
0.000
HDX
Monodelphis domestica
ENSMODG00000014307
I
0.000
ENSMPUG00000006315
Mustela putorius furo
ENSMPUG00000006315
I
0.000
Hdx
Mus musculus
ENSMUSG00000034551
D
0.000
Myotis_brandtii_HDX_10020373
Myotis brandtii
Myotis_brandtii_HDX_10020373
I
0.000
ENSNLEG00000002624
Nomascus leucogenys
ENSNLEG00000002624
I
0.000
Ogr06876
Ophisaurus gracilis
Ogr06876
I
0.000
ENSONIG00000017662
Oreochromis niloticus
ENSONIG00000017662
I
0.000
HDX
Oryctolagus cuniculus
ENSOCUG00000000903
I
0.000
hdx
Oryzias latipes
ENSORLG00000008466
I
0.000
HDX
Otolemur garnettii
ENSOGAG00000031446
I
0.000
ENSOARG00000001832
Ovis aries
ENSOARG00000001832
I
0.000
HDX
Pan troglodytes
ENSPTRG00000022065
I
0.000
ENSPANG00000014327
Papio anubis
ENSPANG00000014327
I
0.000
ENSPSIG00000003320
Pelodiscus sinensis
ENSPSIG00000003320
I
0.000
ENSPMAG00000004328
Petromyzon marinus
ENSPMAG00000004328
I
0.000
ENSPFOG00000004291
Poecilia formosa
ENSPFOG00000004291
I
0.000
Pvit_02951
Pogona vitticeps
Pvit_02951
I
0.000
ENSPPYG00000020514
Pongo abelii
ENSPPYG00000020514
I
0.000
HDX
Pteropus vampyrus
ENSPVAG00000015095
I
0.000
Hdx
Rattus norvegicus
ENSRNOG00000037799
I
0.000
ENSSHAG00000014376
Sarcophilus harrisii
ENSSHAG00000014376
I
0.000
HDX
Sorex araneus
ENSSARG00000009351
I
0.000
HDX
Taeniopygia guttata
ENSTGUG00000002499
I
0.000
hdx
Takifugu rubripes
ENSTRUG00000008150
I
0.000
ENSTSYG00000009619
Tarsius syrichta
ENSTSYG00000009619
I
0.000
rps6kal
Tetraodon nigroviridis
ENSTNIG00000015774
I
0.000
HDX
Tursiops truncatus
ENSTTRG00000000100
I
0.000
HDX
Vicugna pacos
ENSVPAG00000003255
I
0.000
hdx
Xenopus tropicalis
XB-GENE-853748
I
0.000
ENSXMAG00000011901
Xiphophorus maculatus
ENSXMAG00000011901
I
0.000