kdm2ab (Danio rerio)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSDARG00000078133 T167922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.851 0.851
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.702 0.702
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.702 0.702
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.702 0.702
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000099910 CxxC 512 558

Links

Other CxxC family TFs
Other Danio rerio TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.000
fgenesh1_pg.C_scaffold_4001851 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001851 N 0.000
SCL9 Arabidopsis thaliana AT2G37650 N 0.000
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.000
Bo3g031890 Brassica oleracea Bo3g031890 N 0.000
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.000
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.000
Cla018179 Citrullus lanatus Cla018179 N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.000
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.000
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.000
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.000
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.000
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
29767.m000200 Ricinus communis 29767.m000200 N 0.000
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000