Afo_R004362 (Aptenodytes forsteri)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Afo_R004362 T168558_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CXXC5
M01210_2.00 		Homo sapiens
NNNDCKNN
NNMGHNNN		 PBM
Lambert et al.(2019)
pTH11216 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R004362 CxxC 188 229

Links

Other CxxC family TFs
Other Aptenodytes forsteri TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I
BHLH106 Arabidopsis thaliana AT2G41130 N
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N
Bo3g035410 Brassica oleracea Bo3g035410 N
Bo4g012960 Brassica oleracea Bo4g012960 N
Bo4g112750 Brassica oleracea Bo4g112750 N
Bo4g190700 Brassica oleracea Bo4g190700 N
Bra016951 Brassica rapa Bra016951 N
Bra004599 Brassica rapa Bra004599 N
Bra014672 Brassica rapa Bra014672 N
PK23387.1 Cannabis sativa PK23387.1 N
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N
Carubv10017947m.g Capsella rubella Carubv10017947m.g N
Carubv10023903m.g Capsella rubella Carubv10023903m.g N
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N
Ca_07159 Cicer arietinum Ca_07159 N
Cla017413 Citrullus lanatus Cla017413 N
Cla019977 Citrullus lanatus Cla019977 I
Cucsa.340200 Cucumis sativus Cucsa.340200 N
Cucsa.213230 Cucumis sativus Cucsa.213230 I
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N
GLYMA19G30910 Glycine max GLYMA19G30910 N
GLYMA03G28150 Glycine max GLYMA03G28150 N
GLYMA02G23590 Glycine max GLYMA02G23590 N
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N
Lus10042017.g Linum usitatissimum Lus10042017.g N
Lus10018020.g Linum usitatissimum Lus10018020.g N
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N
MDP0000213892 Malus domestica MDP0000213892 N
MDP0000138102 Malus domestica MDP0000138102 N
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N
OS03G0811400 Oryza sativa OS03G0811400 N
Pavir.J24868 Panicum virgatum Pavir.J24868 N
Pavir.J02699 Panicum virgatum Pavir.J02699 N
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N
Pm025589 Prunus mume Pm025589 N
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N
30180.m001071 Ricinus communis 30180.m001071 N
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N
Sb01g003830 Sorghum bicolor Sb01g003830 N
TCM_024016 Theobroma cacao TCM_024016 N
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I
GRMZM2G027068 Zea mays GRMZM2G027068 N