CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s03000
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0010s03000
T180099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s03000.1
FAR1
71
147
EFYSVYATRVGFRTRTGQLYRSRTDGSVASRRFVCSKEGFQLNSRMGCPAFIRVQRRDSGKWVVDQIHKDHNHELGD
POPTR_0010s03000.1
FAR1
225
301
HFYLRYADEAGFKTRIGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCGAFMRIKRQDSGTWMVDRLQKDHNHDLEP
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003304
Oryza indica
BGIOSGA003304
N
0.000
ONIVA01G14280
Oryza nivara
ONIVA01G14280
N
0.000
OPUNC01G11730
Oryza punctata
OPUNC01G11730
N
0.000
ORUFI01G13020
Oryza rufipogon
ORUFI01G13020
N
0.000
Pavir.Ab01824
Panicum virgatum
Pavir.Ab01824
N
0.000
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.000
Pavir.J14267
Panicum virgatum
Pavir.J14267
N
0.000
Si019470m.g
Setaria italica
Si019470m.g
N
0.000
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.000
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.000