mgf008053m (Mimulus guttatus)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 mgf008053m T181143_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.875 0.875
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf008053m FAR1 65 152

Links

Other FAR1 family TFs
Other Mimulus guttatus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK01854.1 Cannabis sativa PK01854.1 N
Cucsa.382200 Cucumis sativus Cucsa.382200 N
gene01678-v1.0-hybrid Fragaria vesca gene01678-v1.0-hybrid N
MDP0000236732 Malus domestica MDP0000236732 N
MDP0000517554 Malus domestica MDP0000517554 N
MDP0000802164 Malus domestica MDP0000802164 N
C1orf35 Otolemur garnettii ENSOGAG00000010978 I
Pm021667 Prunus mume Pm021667 N
PRUPE_ppa008471mg Prunus persica PRUPE_ppa008471mg N
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I