orange1.1g005549m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g005549m.g T181618_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g005549m FAR1 69 161
orange1.1g005560m FAR1 69 161

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FRS10 Arabidopsis thaliana AT5G28530 N 0.753
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.764
Bo2g152930 Brassica oleracea Bo2g152930 N 0.753
Bra020611 Brassica rapa Bra020611 N 0.708
PK09224.1 Cannabis sativa PK09224.1 N 0.742
PK07950.1 Cannabis sativa PK07950.1 N 0.910
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.753
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.753
Ca_07896 Cicer arietinum Ca_07896 N 0.921
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.753
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 1.000
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.753
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.944
Eucgr.L00168 Eucalyptus grandis Eucgr.L00168 N 0.854
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.933
Eucgr.D01455 Eucalyptus grandis Eucgr.D01455 N 0.767
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.742
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.742
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.910
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.742
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.933
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.742
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.944
MDP0000249284 Malus domestica MDP0000249284 N 0.944
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.933
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.753
mgf004308m Mimulus guttatus mgf004308m N 0.753
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.730
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.933
Pm015052 Prunus mume Pm015052 N 0.742
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.944
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.742
29758.m000681 Ricinus communis 29758.m000681 N 0.944
28859.m000324 Ricinus communis 28859.m000324 N 0.753
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.730
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.933
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.753
TCM_030416 Theobroma cacao TCM_030416 N 0.955
TCM_020251 Theobroma cacao TCM_020251 N 0.753
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.753
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.966