Pavir.Ab01899 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Ab01899 T181664_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab01899.1.p FAR1 93 181
Pavir.Ab01899.2.p FAR1 93 181
Pavir.Ab01899.3.p FAR1 93 181
Pavir.Ab01899.4.p FAR1 93 181

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.000
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.000
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N 0.000
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.000
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.000
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.000
TCL2 Arabidopsis lyrata scaffold_401531.1 N 0.000
ETC2 Arabidopsis thaliana AT2G30420 N 0.000
TRY Arabidopsis thaliana AT5G53200 N 0.000
ETC3 Arabidopsis thaliana AT4G01060 N 0.000
CPC Arabidopsis thaliana AT2G46410 N 0.000
TCL1 Arabidopsis thaliana AT2G30432 N 0.000
TCL2 Arabidopsis thaliana AT2G30424 N 0.000
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.000
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N 0.000
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N 0.000
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.000
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.000
Bo4g009260 Brassica oleracea Bo4g009260 N 0.000
Bo4g197120 Brassica oleracea Bo4g197120 N 0.000
Bo3g039260 Brassica oleracea Bo3g039260 N 0.000
Bo9g110930 Brassica oleracea Bo9g110930 N 0.000
Bo2g046050 Brassica oleracea Bo2g046050 N 0.000
Bo2g098940 Brassica oleracea Bo2g098940 N 0.000
Bo3g022870 Brassica oleracea Bo3g022870 N 0.000
Bo3g024610 Brassica oleracea Bo3g024610 N 0.000
Bra039283 Brassica rapa Bra039283 N 0.000
Bra026297 Brassica rapa Bra026297 N 0.000
Bra004539 Brassica rapa Bra004539 N 0.000
Bra008539 Brassica rapa Bra008539 N 0.000
Bra022637 Brassica rapa Bra022637 N 0.000
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.000
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.000
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.000
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.000
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.000
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.000
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.000
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.000
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.000
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.000
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.000
Ca_15029 Cicer arietinum Ca_15029 N 0.000
Cla011563 Citrullus lanatus Cla011563 N 0.000
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.000
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.000
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.000
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.000
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.000
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.000
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.000
Thhalv10017480m.g Eutrema salsugineum Thhalv10017480m.g N 0.000
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N 0.000
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.000
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.000
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.000
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.000
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.000
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
MDP0000583070 Malus domestica MDP0000583070 N 0.000
MDP0000141474 Malus domestica MDP0000141474 N 0.000
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.000
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.000
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.000
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.000
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.000
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.000
Pm018400 Prunus mume Pm018400 N 0.000
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.000
29742.m001447 Ricinus communis 29742.m001447 N 0.000
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.000
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.000
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.000
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.000
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.000
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.000
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.000
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.000
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.000
TCM_005177 Theobroma cacao TCM_005177 N 0.000
TCM_016428 Theobroma cacao TCM_016428 N 0.000
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.000
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.000