Pavir.J07161 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J07161 T181797_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07161.1.p FAR1 26 111

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Aquca_018_00141 Aquilegia coerulea Aquca_018_00141 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo7g093030 Brassica oleracea Bo7g093030 I
Bra010010 Brassica rapa Bra010010 I
Bra020620 Brassica rapa Bra020620 I
PK05128.1 Cannabis sativa PK05128.1 D
PK09738.1 Cannabis sativa PK09738.1 I
PK11472.1 Cannabis sativa PK11472.1 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I
Ca_01234 Cicer arietinum Ca_01234 I
Ca_03753 Cicer arietinum Ca_03753 I
Cla005975 Citrullus lanatus Cla005975 I
Cla011478 Citrullus lanatus Cla011478 I
Cla015037 Citrullus lanatus Cla015037 I
Cla016748 Citrullus lanatus Cla016748 I
Cla020112 Citrullus lanatus Cla020112 I
Cla020641 Citrullus lanatus Cla020641 I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Cucsa.289120 Cucumis sativus Cucsa.289120 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA01G09510 Glycine max GLYMA01G09510 I
GLYMA02G13960 Glycine max GLYMA02G13960 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA10G30410 Glycine max GLYMA10G30410 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GLYMA20G36750 Glycine max GLYMA20G36750 I
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10026973.g Linum usitatissimum Lus10026973.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I
MDP0000176747 Malus domestica MDP0000176747 I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000270365 Malus domestica MDP0000270365 I
MDP0000431572 Malus domestica MDP0000431572 I
MDP0000441891 Malus domestica MDP0000441891 I
MDP0000891108 Malus domestica MDP0000891108 I
MDP0000891899 Malus domestica MDP0000891899 I
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava24010.valid.m1 Manihot esculenta cassava24010.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava32522.m1 Manihot esculenta cassava32522.m1 I
cassava46237.m1 Manihot esculenta cassava46237.m1 I
MTR_1g080920 Medicago truncatula MTR_1g080920 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
MTR_7g115120 Medicago truncatula MTR_7g115120 I
mgf007535m Mimulus guttatus mgf007535m I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
mgf013074m Mimulus guttatus mgf013074m I
mgf017392m Mimulus guttatus mgf017392m I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G15640_001 Musa acuminata GSMUA_Achr1G15640_001 I
GSMUA_Achr1G23640_001 Musa acuminata GSMUA_Achr1G23640_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OBART06G23730 Oryza barthii OBART06G23730 I
OBART12G18120 Oryza barthii OBART12G18120 I
OB02G14920 Oryza brachyantha OB02G14920 I
OB02G19520 Oryza brachyantha OB02G19520 I
OB06G31430 Oryza brachyantha OB06G31430 I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OGLUM06G24950 Oryza glumaepatula OGLUM06G24950 I
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA020738 Oryza indica BGIOSGA020738 I
BGIOSGA020743 Oryza indica BGIOSGA020743 I
BGIOSGA037742 Oryza indica BGIOSGA037742 I
OLONG_019560 Oryza longistaminata OLONG_019560 I
OLONG_021042 Oryza longistaminata OLONG_021042 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI06G23650 Oryza meridionalis OMERI06G23650 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA06G27820 Oryza nivara ONIVA06G27820 I
ONIVA12G16860 Oryza nivara ONIVA12G16860 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC06G21410 Oryza punctata OPUNC06G21410 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I
OS02G0266800 Oryza sativa OS02G0266800 D
OS06G0662200 Oryza sativa OS06G0662200 I
OS12G0601800 Oryza sativa OS12G0601800 I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I
POPTR_0006s29250 Populus trichocarpa POPTR_0006s29250 I
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
Pm003522 Prunus mume Pm003522 I
Pm005087 Prunus mume Pm005087 I
Pm020231 Prunus mume Pm020231 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I
29598.m000468 Ricinus communis 29598.m000468 I
29883.m001986 Ricinus communis 29883.m001986 I
30131.m007078 Ricinus communis 30131.m007078 I
30138.m003866 Ricinus communis 30138.m003866 I
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Si007043m.g Setaria italica Si007043m.g I
Si017778m.g Setaria italica Si017778m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
Sb04g005020 Sorghum bicolor Sb04g005020 I
Sb08g020600 Sorghum bicolor Sb08g020600 I
Sb10g026450 Sorghum bicolor Sb10g026450 I
TCM_004222 Theobroma cacao TCM_004222 I
TCM_026349 Theobroma cacao TCM_026349 I
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
GRMZM2G073427 Zea mays GRMZM2G073427 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GRMZM2G103647 Zea mays GRMZM2G103647 I