CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PNEG_00623
(
Pneumocystis murina
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
PNEG_00623
T188360_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06173
M01992_2.00
Neurospora crassa
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH8896
0.829
0.767
HCM1
M00044_2.00
Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN
PBM
Badis et al.(2008)
HCM1_2157
0.709
0.593
HCM1
M07473_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1
0.709
0.593
HCM1
M08554_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
Misc
DeBoer et al.(2011)
YCR065W_570
0.709
0.593
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.702
0.581
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.701
0.570
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.701
0.570
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.701
0.570
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.701
0.570
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.701
0.570
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.701
0.570
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.701
0.570
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.701
0.570
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.700
0.570
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.700
0.570
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.700
0.570
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.700
0.570
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.700
0.570
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.700
0.570
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.700
0.570
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.697
0.581
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.697
0.581
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.697
0.581
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.697
0.581
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.697
0.581
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.697
0.581
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.697
0.581
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.697
0.581
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.697
0.581
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.697
0.581
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.697
0.558
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMR11024
Forkhead
163
252
KPPYSYATLIGMAILRAPQRKLTLSAIYHWISHTFEYYCNNDSGWQNSIRHNLSLNKAFVKQERPKDEPGKGNYWTIEPGYEFQFMKGRT
Links
Other
Forkhead
family TFs
Other
Pneumocystis murina
TFs
521 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003491
Ailuropoda melanoleuca
ENSAMEG00000003491
I
ENSAPLG00000010058
Anas platyrhynchos
ENSAPLG00000010058
I
Afo_R000663
Aptenodytes forsteri
Afo_R000663
I
ENSAMXG00000017952
Astyanax mexicanus
ENSAMXG00000017952
I
ENSP00000256429-D1
Bos grunniens
ENSP00000256429-D1
I
MBD2
Callithrix jacchus
ENSCJAG00000001862
I
MBD3
Canis familiaris
ENSCAFG00000019503
N
MBD2
Cavia porcellus
ENSCPOG00000006832
I
Cmyd_10012649
Chelonia mydas
Cmyd_10012649
I
ENSCSAG00000018106
Chlorocebus sabaeus
ENSCSAG00000018106
I
mbd3a
Danio rerio
ENSDARG00000061774
I
MBD3
Equus caballus
ENSECAG00000015485
I
ENSECAG00000022368
Equus caballus
ENSECAG00000022368
I
ENSFCAG00000022047
Felis catus
ENSFCAG00000022047
I
ENSGMOG00000008953
Gadus morhua
ENSGMOG00000008953
I
MBD3
Gasterosteus aculeatus
ENSGACG00000012755
I
ENSLACG00000016038
Latimeria chalumnae
ENSLACG00000016038
I
ENSLOCG00000003370
Lepisosteus oculatus
ENSLOCG00000003370
I
ENSMEUG00000016480
Macropus eugenii
ENSMEUG00000016480
I
ENSMGAG00000009222
Meleagris gallopavo
ENSMGAG00000009222
N
MBD2
Microcebus murinus
ENSMICG00000008970
I
Mbd3
Mus musculus
ENSMUSG00000035478
N
MBD3
Ochotona princeps
ENSOPRG00000008719
I
ENSONIG00000012635
Oreochromis niloticus
ENSONIG00000012635
I
ENSOANG00000030623
Ornithorhynchus anatinus
ENSOANG00000030623
I
ENSOARG00000004770
Ovis aries
ENSOARG00000004770
I
ENSPMAG00000000415
Petromyzon marinus
ENSPMAG00000000415
N
Pvit_04402
Pogona vitticeps
Pvit_04402
I
ENSPPYG00000009325
Pongo abelii
ENSPPYG00000009325
I
ENSTSYG00000013361
Tarsius syrichta
ENSTSYG00000013361
I
MBD3
Tetraodon nigroviridis
ENSTNIG00000010627
N
MBD2
Tupaia belangeri
ENSTBEG00000015292
I
ENSVPAG00000012298
Vicugna pacos
ENSVPAG00000012298
N
ENSXMAG00000003932
Xiphophorus maculatus
ENSXMAG00000003932
I
ENSXMAG00000012716
Xiphophorus maculatus
ENSXMAG00000012716
I