OLONG_011157 (Oryza longistaminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OLONG_011157 T194420_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.811 0.833
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_011157-R1 GATA 24 59

Links

Other GATA family TFs
Other Oryza longistaminata TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00250380 Amborella trichopoda AMTR_s00025p00250380 N 0.809
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N 0.842
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.811
GATA16 Arabidopsis thaliana AT5G49300 D 0.811
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.811
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.829
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.856
Bo00847s050 Brassica oleracea Bo00847s050 I 0.811
Bra020650 Brassica rapa Bra020650 I 0.838
PK18820.1 Cannabis sativa PK18820.1 I 0.816
PK21934.1 Cannabis sativa PK21934.1 I 0.814
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.811
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.829
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.829
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.811
Ca_02992 Cicer arietinum Ca_02992 I 0.810
Cla005266 Citrullus lanatus Cla005266 N 0.828
Cla009422 Citrullus lanatus Cla009422 I 0.816
Cla022104 Citrullus lanatus Cla022104 I 0.811
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.814
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.816
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.828
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.814
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.816
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.828
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.816
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.811
CME102C Cyanidioschyzon merolae CME102C N 0.805
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.811
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.816
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.811
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.811
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.814
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.814
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.811
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.828
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.814
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.829
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N 0.842
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.856
LPERR03G33900 Leersia perrieri LPERR03G33900 I 0.829
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.867
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.811
Lus10020684.g Linum usitatissimum Lus10020684.g N 0.823
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.823
Lus10031464.g Linum usitatissimum Lus10031464.g I 0.809
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.811
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.810
MDP0000309902 Malus domestica MDP0000309902 I 0.809
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.829
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.829
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.814
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.811
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.810
mgf003937m Mimulus guttatus mgf003937m I 0.811
mgf011737m Mimulus guttatus mgf011737m N 0.814
mgf022078m Mimulus guttatus mgf022078m I 0.815
GSMUA_Achr1G14780_001 Musa acuminata GSMUA_Achr1G14780_001 N 0.814
GSMUA_Achr7G03800_001 Musa acuminata GSMUA_Achr7G03800_001 N 0.809
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.815
OBART01G45830 Oryza barthii OBART01G45830 I 0.867
OBART03G39750 Oryza barthii OBART03G39750 I 0.829
OB01G55040 Oryza brachyantha OB01G55040 I 0.867
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.867
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.867
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I 0.829
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.867
BGIOSGA013867 Oryza indica BGIOSGA013867 I 0.829
BGIOSGA013869 Oryza indica BGIOSGA013869 I 0.829
OLONG_023900 Oryza longistaminata OLONG_023900 I 0.829
OMERI03G36600 Oryza meridionalis OMERI03G36600 I 0.829
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.867
ONIVA03G41600 Oryza nivara ONIVA03G41600 I 0.829
OPUNC03G36900 Oryza punctata OPUNC03G36900 I 0.829
OPUNC03G36910 Oryza punctata OPUNC03G36910 I 0.829
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.867
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I 0.829
OS01G0976800 Oryza sativa OS01G0976800 I 0.867
OS03G0831200 Oryza sativa OS03G0831200 I 0.829
Pavir.Ab00108 Panicum virgatum Pavir.Ab00108 N 0.825
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.856
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.829
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.810
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.810
Pm003128 Prunus mume Pm003128 I 0.841
Pm008287 Prunus mume Pm008287 I 0.811
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.811
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.841
29889.m003248 Ricinus communis 29889.m003248 I 0.814
30128.m008883 Ricinus communis 30128.m008883 N 0.814
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.829
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.829
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.810
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.810
Si002983m.g Setaria italica Si002983m.g I 0.856
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.816
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.816
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.856
TCM_004753 Theobroma cacao TCM_004753 I 0.814
TCM_021303 Theobroma cacao TCM_021303 I 0.811
TCM_026732 Theobroma cacao TCM_026732 I 0.829
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.856
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.856
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.856
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.816
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.856
GRMZM2G138967 Zea mays GRMZM2G138967 N 0.825