CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC05G03600
(
Oryza punctata
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
OPUNC05G03600
T194492_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC05G03600.1
GATA
27
62
CVECGATTTPMWRGGPTGPRSLCNACGIRYRKKRRQ
Links
Other
GATA
family TFs
Other
Oryza punctata
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GATA23
Arabidopsis thaliana
AT5G26930
N
0.822
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
0.861
BRADI2G35057
Brachypodium distachyon
BRADI2G35057
N
0.848
Bra009926
Brassica rapa
Bra009926
N
0.811
Eucgr.H01071
Eucalyptus grandis
Eucgr.H01071
N
0.809
LPERR01G13070
Leersia perrieri
LPERR01G13070
N
0.853
cassava16506.m1
Manihot esculenta
cassava16506.m1
N
0.816
OBART05G03900
Oryza barthii
OBART05G03900
N
0.867
OBART01G14380
Oryza barthii
OBART01G14380
N
0.853
OB01G24090
Oryza brachyantha
OB01G24090
N
0.853
OB05G13650
Oryza brachyantha
OB05G13650
N
0.867
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
0.867
ORGLA01G0118700
Oryza glaberrima
ORGLA01G0118700
N
0.853
OGLUM01G16180
Oryza glumaepatula
OGLUM01G16180
N
0.853
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
0.867
OLONG_020882
Oryza longistaminata
OLONG_020882
N
0.867
ONIVA04G04160
Oryza nivara
ONIVA04G04160
N
0.853
OPUNC01G14080
Oryza punctata
OPUNC01G14080
N
0.853
ORUFI01G16060
Oryza rufipogon
ORUFI01G16060
N
0.853
OS01G0343300
Oryza sativa
OS01G0343300
N
0.853
OS05G0155400
Oryza sativa
OS05G0155400
N
0.867
Pavir.Ea01306
Panicum virgatum
Pavir.Ea01306
N
0.853
Pavir.Eb02364
Panicum virgatum
Pavir.Eb02364
N
0.853
Pavir.J31164
Panicum virgatum
Pavir.J31164
N
0.862
Pavir.J34225
Panicum virgatum
Pavir.J34225
N
0.450
Si004417m.g
Setaria italica
Si004417m.g
N
0.853
Si011269m.g
Setaria italica
Si011269m.g
N
0.862
Sb03g013700
Sorghum bicolor
Sb03g013700
N
0.853
Sb09g004315
Sorghum bicolor
Sb09g004315
N
0.862
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
0.862
GRMZM2G104390
Zea mays
GRMZM2G104390
N
0.853
GRMZM2G052616
Zea mays
GRMZM2G052616
N
0.853